Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.38□□□□□ -1.55
YBX1P67809 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.37□□□□□ -1.55
YBX1P67809 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
YBX1P67809 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.37□□□□□ -1.55
YBX1P67809 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
YBX1P67809 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.37□□□□□ -1.55
YBX1P67809 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
YBX1P67809 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 GNG5P1-201ENST00000255500 204 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 IGKV7-3-201ENST00000357453 298 ntBASIC5.37□□□□□ -1.55
YBX1P67809 Y_RNA.67-201ENST00000362870 100 ntBASIC5.37□□□□□ -1.55
YBX1P67809 Y_RNA.138-201ENST00000363462 102 ntBASIC5.37□□□□□ -1.55
YBX1P67809 SNORA51.2-201ENST00000364595 132 ntBASIC5.37□□□□□ -1.55
YBX1P67809 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.37□□□□□ -1.55
YBX1P67809 U3.25-201ENST00000391209 220 ntBASIC5.37□□□□□ -1.55
YBX1P67809 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 AC073264.1-201ENST00000411508 416 ntBASIC5.37□□□□□ -1.55
YBX1P67809 GPS2P1-201ENST00000411761 986 ntBASIC5.37□□□□□ -1.55
YBX1P67809 OR2AT2P-201ENST00000413438 905 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.37□□□□□ -1.55
YBX1P67809 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.37□□□□□ -1.55
YBX1P67809 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.37□□□□□ -1.55
YBX1P67809 MRPS21P2-201ENST00000424704 264 ntBASIC5.37□□□□□ -1.55
YBX1P67809 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.37□□□□□ -1.55
YBX1P67809 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.37□□□□□ -1.55
YBX1P67809 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.37□□□□□ -1.55
YBX1P67809 OR6D1P-201ENST00000436165 939 ntBASIC5.37□□□□□ -1.55
YBX1P67809 ACTR3P2-201ENST00000439585 1257 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AC132479.1-201ENST00000449160 144 ntBASIC5.37□□□□□ -1.55
YBX1P67809 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.37□□□□□ -1.55
YBX1P67809 MTND1P12-201ENST00000455231 147 ntBASIC5.37□□□□□ -1.55
YBX1P67809 MTCO1P42-201ENST00000457379 726 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AC097493.1-201ENST00000463958 372 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AC096741.1-201ENST00000472250 846 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AC015724.1-201ENST00000478577 156 ntBASIC5.37□□□□□ -1.55
YBX1P67809 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.37□□□□□ -1.55
YBX1P67809 KLRA1P-201ENST00000503499 986 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AC114967.1-201ENST00000504890 259 ntBASIC5.37□□□□□ -1.55
YBX1P67809 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.37□□□□□ -1.55
YBX1P67809 Y_RNA.672-201ENST00000516289 104 ntBASIC5.37□□□□□ -1.55
YBX1P67809 IGKV2D-10-201ENST00000520194 281 ntBASIC5.37□□□□□ -1.55
YBX1P67809 IGBP1P1-201ENST00000554337 1009 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AC022404.1-201ENST00000555320 273 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.37□□□□□ -1.55
YBX1P67809 AL355375.2-201ENST00000574825 175 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AP001180.3-201ENST00000582221 145 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.37□□□□□ -1.55
YBX1P67809 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.37□□□□□ -1.55
YBX1P67809 AC018638.8-201ENST00000588755 281 ntBASIC5.37□□□□□ -1.55
YBX1P67809 TPMTP1-201ENST00000592307 737 ntBASIC5.37□□□□□ -1.55
YBX1P67809 CKS1BP3-201ENST00000600888 237 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AL359999.1-201ENST00000604513 294 ntBASIC5.37□□□□□ -1.55
YBX1P67809 NANOGP3-201ENST00000605855 286 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AL133255.1-201ENST00000606374 441 ntBASIC5.37□□□□□ -1.55
YBX1P67809 RMST_3.1-201ENST00000611651 109 ntBASIC5.37□□□□□ -1.55
YBX1P67809 AC068722.2-201ENST00000618734 544 ntBASIC5.37□□□□□ -1.55
YBX1P67809 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.37□□□□□ -1.55
YBX1P67809 AC026634.1-201ENST00000634369 198 ntBASIC5.37□□□□□ -1.55
YBX1P67809 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
YBX1P67809 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
YBX1P67809 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
YBX1P67809 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.37□□□□□ -1.55
YBX1P67809 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.37□□□□□ -1.55
YBX1P67809 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
YBX1P67809 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.36□□□□□ -1.55
YBX1P67809 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
YBX1P67809 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.36□□□□□ -1.55
YBX1P67809 OR11H4-201ENST00000315409 1082 ntBASIC5.36□□□□□ -1.55
YBX1P67809 OR52B1P-201ENST00000316506 909 ntBASIC5.36□□□□□ -1.55
YBX1P67809 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.36□□□□□ -1.55
YBX1P67809 MIR320B1-201ENST00000390209 79 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AL009179.1-201ENST00000406085 265 ntBASIC5.36□□□□□ -1.55
YBX1P67809 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.36□□□□□ -1.55
YBX1P67809 AC079809.1-201ENST00000415468 276 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AL353193.1-201ENST00000421444 268 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AC007161.1-204ENST00000423039 460 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.36□□□□□ -1.55
YBX1P67809 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.36□□□□□ -1.55
YBX1P67809 AC133104.1-201ENST00000429100 218 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.36□□□□□ -1.55
YBX1P67809 RPL22P17-201ENST00000438729 315 ntBASIC5.36□□□□□ -1.55
YBX1P67809 LINC02210-201ENST00000444561 288 ntBASIC5.36□□□□□ -1.55
YBX1P67809 AL450996.1-201ENST00000445574 1202 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms