Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.73□□□□□ -1.65
CLRN1P58418 PTGES3P3-201ENST00000511479 482 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AC024589.1-201ENST00000512207 263 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.73□□□□□ -1.65
CLRN1P58418 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.73□□□□□ -1.65
CLRN1P58418 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.73□□□□□ -1.65
CLRN1P58418 OR5AP1P-201ENST00000529730 940 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 ZNF705CP-201ENST00000530515 889 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.73□□□□□ -1.65
CLRN1P58418 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.73□□□□□ -1.65
CLRN1P58418 TPMTP1-201ENST00000592307 737 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 SUGT1P3-202ENST00000604259 383 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 AL589674.2-201ENST00000604304 337 ntBASIC4.73□□□□□ -1.65
CLRN1P58418 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLRN1P58418 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CLRN1P58418 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.73□□□□□ -1.65
CLRN1P58418 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.72□□□□□ -1.65
CLRN1P58418 RPL23AP57-201ENST00000332361 466 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 Y_RNA.9-201ENST00000362354 101 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 SNORA51.6-201ENST00000384151 125 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 Y_RNA.450-201ENST00000384198 113 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 FCF1P10-201ENST00000407590 479 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AL023807.1-201ENST00000407932 359 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 MIR1277-201ENST00000408536 78 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 CCDC58P2-201ENST00000417131 366 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC004690.1-201ENST00000418216 328 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.72□□□□□ -1.65
CLRN1P58418 AL136231.1-201ENST00000429407 730 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AL358934.1-201ENST00000432346 324 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC009961.2-201ENST00000435771 251 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AL451074.3-201ENST00000437709 472 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 AC090804.1-201ENST00000448870 490 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.72□□□□□ -1.65
CLRN1P58418 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.72□□□□□ -1.65
CLRN1P58418 HIGD1AP8-201ENST00000453927 274 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC099563.1-201ENST00000456086 418 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.72□□□□□ -1.65
CLRN1P58418 AC058823.1-201ENST00000485315 474 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 RPL7P51-201ENST00000490532 749 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.72□□□□□ -1.65
CLRN1P58418 AC093824.1-201ENST00000508796 343 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 AC098976.1-201ENST00000513014 541 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 SNORA70.11-201ENST00000515987 138 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 SNORA70.13-201ENST00000516116 138 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.72□□□□□ -1.65
CLRN1P58418 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.72□□□□□ -1.65
CLRN1P58418 AP003467.2-201ENST00000520175 319 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.72□□□□□ -1.65
CLRN1P58418 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.72□□□□□ -1.65
CLRN1P58418 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLRN1P58418 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 AL121579.1-201ENST00000555129 305 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AL391840.1-201ENST00000571144 367 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC090312.1-201ENST00000580637 348 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.72□□□□□ -1.65
CLRN1P58418 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 AP000907.4-201ENST00000604143 237 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC009597.2-201ENST00000604659 592 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 LARP7P1-201ENST00000605576 316 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 AC090948.2-201ENST00000607363 564 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.72□□□□□ -1.65
CLRN1P58418 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 FARSBP1-201ENST00000435808 1778 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CLRN1P58418 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
CLRN1P58418 AP000473.2-201ENST00000602659 1537 ntBASIC4.72□□□□□ -1.65
CLRN1P58418 PANDAR-201ENST00000629595 1506 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms