Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR3065-201ENST00000390137 79 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 LAP3P1-201ENST00000403648 294 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 RN7SKP33-201ENST00000410942 340 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 OR8G2P-201ENST00000412796 908 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 NUP35P2-201ENST00000416748 943 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.34□□□□□ -1.71
LIMK1P53667 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.34□□□□□ -1.71
LIMK1P53667 AC234064.1-201ENST00000436312 247 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.34□□□□□ -1.71
LIMK1P53667 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.34□□□□□ -1.71
LIMK1P53667 AL050341.1-201ENST00000447743 313 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AC233982.1-201ENST00000451247 436 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 RNU7-140P-201ENST00000459546 60 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.34□□□□□ -1.71
LIMK1P53667 RN7SL691P-201ENST00000494487 301 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.34□□□□□ -1.71
LIMK1P53667 AC023141.12-201ENST00000512399 199 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 MTATP6P9-201ENST00000515039 680 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 RN7SKP96-201ENST00000516948 297 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.34□□□□□ -1.71
LIMK1P53667 AC105233.3-201ENST00000531125 744 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 FKBP1BP1-201ENST00000553366 325 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 ZNF971P-201ENST00000562068 1249 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AC015912.2-201ENST00000571053 181 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LIMK1P53667 AC025946.2-201ENST00000603398 234 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AC091488.1-201ENST00000604239 660 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AC112230.1-201ENST00000604342 547 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LIMK1P53667 AC144521.1-201ENST00000607148 956 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.34□□□□□ -1.71
LIMK1P53667 AL391834.2-201ENST00000609982 546 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AC015813.4-201ENST00000610469 179 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AL109659.3-201ENST00000624985 950 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AC012442.3-202ENST00000636742 206 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 AL445984.1-201ENST00000637834 659 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LIMK1P53667 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
LIMK1P53667 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LIMK1P53667 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LIMK1P53667 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
LIMK1P53667 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LIMK1P53667 CPHL1P-201ENST00000461341 3407 ntBASIC4.34□□□□□ -1.72
LIMK1P53667 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LIMK1P53667 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LIMK1P53667 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.34□□□□□ -1.72
LIMK1P53667 SCN1A-220ENST00000641603 12506 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIMK1P53667 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LIMK1P53667 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIMK1P53667 MAPK10-253ENST00000641010 4072 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.33□□□□□ -1.72
LIMK1P53667 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LIMK1P53667 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIMK1P53667 MTND5P3-201ENST00000438536 1800 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIMK1P53667 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIMK1P53667 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.33□□□□□ -1.72
LIMK1P53667 AC016716.1-201ENST00000265882 708 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 AL512646.1-201ENST00000269395 1077 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 OR56B2P-201ENST00000317102 954 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIMK1P53667 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LIMK1P53667 RN7SKP167-201ENST00000411047 285 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.33□□□□□ -1.72
LIMK1P53667 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.33□□□□□ -1.72
LIMK1P53667 AC069157.1-201ENST00000421749 137 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 OR8F1P-201ENST00000425243 930 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.33□□□□□ -1.72
LIMK1P53667 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.33□□□□□ -1.72
LIMK1P53667 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIMK1P53667 RPS3AP12-201ENST00000443616 753 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 RPL23AP15-201ENST00000450202 459 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.33□□□□□ -1.72
LIMK1P53667 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIMK1P53667 RNA5SP446-201ENST00000515955 82 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 PAICSP4-201ENST00000517543 1253 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.33□□□□□ -1.72
LIMK1P53667 IFITM8P-201ENST00000522529 394 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 IGJP1-201ENST00000522682 475 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.33□□□□□ -1.72
LIMK1P53667 OR8L1P-201ENST00000534005 955 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.33□□□□□ -1.72
LIMK1P53667 OR6C73P-201ENST00000546432 358 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.33□□□□□ -1.72
LIMK1P53667 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.33□□□□□ -1.72
LIMK1P53667 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.33□□□□□ -1.72
LIMK1P53667 AP001542.2-201ENST00000593141 364 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.33□□□□□ -1.72
LIMK1P53667 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.33□□□□□ -1.72
LIMK1P53667 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 AC007546.1-201ENST00000619452 559 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.33□□□□□ -1.72
LIMK1P53667 AC099654.8-201ENST00000637757 681 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 FAM157B-203ENST00000639350 358 ntBASIC4.33□□□□□ -1.72
LIMK1P53667 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.33□□□□□ -1.72
LIMK1P53667 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIMK1P53667 LINC00622-201ENST00000562811 1570 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms