Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL133482.1-201ENST00000415988 498 ntBASIC6.14□□□□□ -1.43
USP11P51784 RPS27AP6-201ENST00000427962 448 ntBASIC6.14□□□□□ -1.43
USP11P51784 RPL21P110-201ENST00000433345 446 ntBASIC6.14□□□□□ -1.43
USP11P51784 ACTR3P2-201ENST00000439585 1257 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.14□□□□□ -1.43
USP11P51784 RPL26P28-201ENST00000451325 435 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.14□□□□□ -1.43
USP11P51784 RPL7P48-201ENST00000461513 746 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC007182.2-201ENST00000489251 402 ntBASIC6.14□□□□□ -1.43
USP11P51784 RPS4XP14-201ENST00000493072 781 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC010493.1-201ENST00000513479 292 ntBASIC6.14□□□□□ -1.43
USP11P51784 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 HMGB1P23-201ENST00000518743 568 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC105029.1-201ENST00000520250 669 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.14□□□□□ -1.43
USP11P51784 HMGB1P40-201ENST00000525121 540 ntBASIC6.14□□□□□ -1.43
USP11P51784 AP004607.2-201ENST00000533949 322 ntBASIC6.14□□□□□ -1.43
USP11P51784 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.14□□□□□ -1.43
USP11P51784 AP003034.1-201ENST00000534621 422 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.14□□□□□ -1.43
USP11P51784 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.14□□□□□ -1.43
USP11P51784 RN7SL356P-201ENST00000582228 248 ntBASIC6.14□□□□□ -1.43
USP11P51784 MIR4307-201ENST00000582802 84 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 MIR7853-201ENST00000584820 132 ntBASIC6.14□□□□□ -1.43
USP11P51784 IMMP1LP3-201ENST00000604197 224 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC090948.2-201ENST00000607363 564 ntBASIC6.14□□□□□ -1.43
USP11P51784 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 AC109583.2-201ENST00000617367 129 ntBASIC6.14□□□□□ -1.43
USP11P51784 AC074101.1-201ENST00000637861 241 ntBASIC6.14□□□□□ -1.43
USP11P51784 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.14□□□□□ -1.43
USP11P51784 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP11P51784 AC010928.1-201ENST00000592477 1447 ntBASIC6.14□□□□□ -1.43
USP11P51784 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 MTCO1P14-201ENST00000441695 1559 ntBASIC6.14□□□□□ -1.43
USP11P51784 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP11P51784 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
USP11P51784 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.13□□□□□ -1.43
USP11P51784 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP11P51784 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP11P51784 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
USP11P51784 Y_RNA.67-201ENST00000362870 100 ntBASIC6.13□□□□□ -1.43
USP11P51784 RNU6-492P-201ENST00000363035 104 ntBASIC6.13□□□□□ -1.43
USP11P51784 RNU6-216P-201ENST00000363282 104 ntBASIC6.13□□□□□ -1.43
USP11P51784 RNY3P3-201ENST00000363816 102 ntBASIC6.13□□□□□ -1.43
USP11P51784 SNORA63C-201ENST00000364578 129 ntBASIC6.13□□□□□ -1.43
USP11P51784 SNORD116-23-201ENST00000384645 92 ntBASIC6.13□□□□□ -1.43
USP11P51784 MIR606-201ENST00000384851 96 ntBASIC6.13□□□□□ -1.43
USP11P51784 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
USP11P51784 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.13□□□□□ -1.43
USP11P51784 RNA5SP487-201ENST00000410186 122 ntBASIC6.13□□□□□ -1.43
USP11P51784 AL359704.1-201ENST00000411586 781 ntBASIC6.13□□□□□ -1.43
USP11P51784 MTND3P17-201ENST00000416968 344 ntBASIC6.13□□□□□ -1.43
USP11P51784 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.13□□□□□ -1.43
USP11P51784 GNG5P5-201ENST00000420444 220 ntBASIC6.13□□□□□ -1.43
USP11P51784 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.13□□□□□ -1.43
USP11P51784 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.13□□□□□ -1.43
USP11P51784 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.13□□□□□ -1.43
USP11P51784 AC073335.1-201ENST00000427776 363 ntBASIC6.13□□□□□ -1.43
USP11P51784 NPM1P34-201ENST00000428821 893 ntBASIC6.13□□□□□ -1.43
USP11P51784 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.13□□□□□ -1.43
USP11P51784 RPL7L1P9-201ENST00000431298 745 ntBASIC6.13□□□□□ -1.43
USP11P51784 AC109583.1-201ENST00000432156 268 ntBASIC6.13□□□□□ -1.43
USP11P51784 CYCSP6-201ENST00000434498 302 ntBASIC6.13□□□□□ -1.43
USP11P51784 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.13□□□□□ -1.43
USP11P51784 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.13□□□□□ -1.43
USP11P51784 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.13□□□□□ -1.43
USP11P51784 TRBV8-2-201ENST00000475637 270 ntBASIC6.13□□□□□ -1.43
USP11P51784 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.13□□□□□ -1.43
USP11P51784 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.13□□□□□ -1.43
USP11P51784 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.13□□□□□ -1.43
USP11P51784 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.13□□□□□ -1.43
USP11P51784 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.13□□□□□ -1.43
USP11P51784 RNU6-277P-201ENST00000516272 106 ntBASIC6.13□□□□□ -1.43
USP11P51784 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.13□□□□□ -1.43
USP11P51784 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.13□□□□□ -1.43
USP11P51784 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.13□□□□□ -1.43
USP11P51784 AP003467.2-201ENST00000520175 319 ntBASIC6.13□□□□□ -1.43
USP11P51784 AP000790.1-201ENST00000528891 737 ntBASIC6.13□□□□□ -1.43
USP11P51784 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP11P51784 AC013828.2-201ENST00000532487 235 ntBASIC6.13□□□□□ -1.43
USP11P51784 AC090022.1-201ENST00000546569 311 ntBASIC6.13□□□□□ -1.43
USP11P51784 AC037471.2-201ENST00000564941 598 ntBASIC6.13□□□□□ -1.43
USP11P51784 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.13□□□□□ -1.43
USP11P51784 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.13□□□□□ -1.43
USP11P51784 AC018638.8-201ENST00000588755 281 ntBASIC6.13□□□□□ -1.43
USP11P51784 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.13□□□□□ -1.43
USP11P51784 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.13□□□□□ -1.43
USP11P51784 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.13□□□□□ -1.43
USP11P51784 AP000769.2-201ENST00000602344 396 ntBASIC6.13□□□□□ -1.43
USP11P51784 AL162413.1-201ENST00000603198 110 ntBASIC6.13□□□□□ -1.43
USP11P51784 AC012507.3-201ENST00000603556 477 ntBASIC6.13□□□□□ -1.43
USP11P51784 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.13□□□□□ -1.43
USP11P51784 AC097468.3-201ENST00000607956 456 ntBASIC6.13□□□□□ -1.43
USP11P51784 MIR6133-201ENST00000617057 108 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms