Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 XKRYP5-201ENST00000449659 483 ntBASIC3.18□□□□□ -1.9
SRP9P49458 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
SRP9P49458 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.18□□□□□ -1.9
SRP9P49458 RPL7P15-201ENST00000461190 712 ntBASIC3.18□□□□□ -1.9
SRP9P49458 AL133162.1-201ENST00000463228 453 ntBASIC3.18□□□□□ -1.9
SRP9P49458 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
SRP9P49458 RPL23AP73-201ENST00000492507 471 ntBASIC3.18□□□□□ -1.9
SRP9P49458 FTH1P24-201ENST00000503502 462 ntBASIC3.18□□□□□ -1.9
SRP9P49458 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
SRP9P49458 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.18□□□□□ -1.9
SRP9P49458 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.18□□□□□ -1.9
SRP9P49458 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.18□□□□□ -1.9
SRP9P49458 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.18□□□□□ -1.9
SRP9P49458 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.18□□□□□ -1.9
SRP9P49458 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.18□□□□□ -1.9
SRP9P49458 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.18□□□□□ -1.9
SRP9P49458 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.18□□□□□ -1.9
SRP9P49458 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.18□□□□□ -1.9
SRP9P49458 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 AC018754.1-201ENST00000607486 925 ntBASIC3.18□□□□□ -1.9
SRP9P49458 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 AL161912.2-201ENST00000565707 3007 ntBASIC3.18□□□□□ -1.9
SRP9P49458 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRP9P49458 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
SRP9P49458 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP9P49458 PWAR6-201ENST00000552334 4618 ntBASIC3.18□□□□□ -1.9
SRP9P49458 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SRP9P49458 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SRP9P49458 AL118496.1-201ENST00000440201 1812 ntBASIC3.17□□□□□ -1.9
SRP9P49458 AC007496.3-201ENST00000624987 3443 ntBASIC3.17□□□□□ -1.9
SRP9P49458 AL672296.1-201ENST00000427780 2158 ntBASIC3.17□□□□□ -1.9
SRP9P49458 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.17□□□□□ -1.9
SRP9P49458 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.17□□□□□ -1.9
SRP9P49458 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SRP9P49458 AL034374.1-201ENST00000406329 351 ntBASIC3.17□□□□□ -1.9
SRP9P49458 CYCSP19-201ENST00000411715 316 ntBASIC3.17□□□□□ -1.9
SRP9P49458 TRGV6-201ENST00000417928 299 ntBASIC3.17□□□□□ -1.9
SRP9P49458 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP9P49458 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP9P49458 TRIAP1P1-201ENST00000427062 225 ntBASIC3.17□□□□□ -1.9
SRP9P49458 AC007389.2-201ENST00000434630 306 ntBASIC3.17□□□□□ -1.9
SRP9P49458 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.17□□□□□ -1.9
SRP9P49458 AC010655.1-201ENST00000449336 292 ntBASIC3.17□□□□□ -1.9
SRP9P49458 AC099563.1-201ENST00000456086 418 ntBASIC3.17□□□□□ -1.9
SRP9P49458 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.17□□□□□ -1.9
SRP9P49458 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.17□□□□□ -1.9
SRP9P49458 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP9P49458 AC005921.1-201ENST00000510589 286 ntBASIC3.17□□□□□ -1.9
SRP9P49458 SCARNA14-201ENST00000516903 136 ntBASIC3.17□□□□□ -1.9
SRP9P49458 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.17□□□□□ -1.9
SRP9P49458 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP9P49458 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP9P49458 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.17□□□□□ -1.9
SRP9P49458 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.17□□□□□ -1.9
SRP9P49458 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.17□□□□□ -1.9
SRP9P49458 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP9P49458 AC005156.1-201ENST00000613371 573 ntBASIC3.17□□□□□ -1.9
SRP9P49458 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.17□□□□□ -1.9
SRP9P49458 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.17□□□□□ -1.9
SRP9P49458 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SRP9P49458 SRP72P2-201ENST00000344851 1979 ntBASIC3.17□□□□□ -1.9
SRP9P49458 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SRP9P49458 SAGE2P-201ENST00000420011 2126 ntBASIC3.17□□□□□ -1.9
SRP9P49458 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SRP9P49458 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SRP9P49458 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP9P49458 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP9P49458 AC007656.2-201ENST00000624902 4547 ntBASIC3.16□□□□□ -1.9
SRP9P49458 Y_RNA.126-201ENST00000363382 111 ntBASIC3.16□□□□□ -1.9
SRP9P49458 RNA5SP42-201ENST00000364278 115 ntBASIC3.16□□□□□ -1.9
SRP9P49458 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP9P49458 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SRP9P49458 RPS7P13-201ENST00000413955 498 ntBASIC3.16□□□□□ -1.9
SRP9P49458 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP9P49458 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SRP9P49458 AL691447.1-201ENST00000419456 387 ntBASIC3.16□□□□□ -1.9
SRP9P49458 KCTD10P1-201ENST00000434203 625 ntBASIC3.16□□□□□ -1.9
SRP9P49458 CBX1P4-201ENST00000439415 457 ntBASIC3.16□□□□□ -1.9
SRP9P49458 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SRP9P49458 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SRP9P49458 RPS3AP46-201ENST00000448352 682 ntBASIC3.16□□□□□ -1.9
SRP9P49458 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP9P49458 RPS4XP2-201ENST00000458402 793 ntBASIC3.16□□□□□ -1.9
SRP9P49458 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP9P49458 CYCSP20-201ENST00000473154 315 ntBASIC3.16□□□□□ -1.9
SRP9P49458 AC020893.1-201ENST00000502452 580 ntBASIC3.16□□□□□ -1.9
SRP9P49458 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP9P49458 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP9P49458 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.16□□□□□ -1.9
SRP9P49458 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP9P49458 AC008011.1-201ENST00000545989 227 ntBASIC3.16□□□□□ -1.9
SRP9P49458 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP9P49458 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.16□□□□□ -1.9
SRP9P49458 AC008507.1-201ENST00000587506 734 ntBASIC3.16□□□□□ -1.9
SRP9P49458 AP003117.2-201ENST00000606010 545 ntBASIC3.16□□□□□ -1.9
SRP9P49458 AC016877.3-201ENST00000606778 504 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms