Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 RPL23AP38-201ENST00000423801 469 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 PSMA2P3-201ENST00000429685 675 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 FTH1P1-201ENST00000437933 532 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AL606490.8-201ENST00000441624 319 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AL590399.6-201ENST00000446396 307 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 SLC31A1P1-201ENST00000451221 567 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 snoU13.1-201ENST00000459157 104 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC092754.2-201ENST00000463506 460 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC013356.1-201ENST00000489027 564 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 OR52A4P-203ENST00000498233 1014 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC108941.1-201ENST00000502853 530 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 NDUFA5P12-201ENST00000503796 343 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 KCTD9P5-201ENST00000504141 1170 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC008638.1-201ENST00000506035 866 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 RAC1P2-201ENST00000511164 579 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 FABP5P12-201ENST00000515543 389 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 BNIP3P38-201ENST00000601117 544 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC112200.1-201ENST00000625015 234 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DMAP28067 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DMAP28067 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DMAP28067 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 RNA5SP42-201ENST00000364278 115 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 RNA5SP505-201ENST00000364748 108 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 MIR199A2-201ENST00000385289 110 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 RNU2-21P-201ENST00000410368 188 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 HMGB3P23-201ENST00000414981 585 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC244453.4-201ENST00000419150 388 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 RPS15AP40-201ENST00000419621 391 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC244098.2-201ENST00000422068 99 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 FAR1P1-201ENST00000427163 934 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 TBCAP1-201ENST00000436520 327 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC006466.1-201ENST00000438721 289 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 TPT1P13-201ENST00000449760 499 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 HMGN2P16-201ENST00000456802 261 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 NF1P3-201ENST00000457709 450 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 RN7SL303P-201ENST00000469773 251 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC021205.2-201ENST00000480069 347 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 RPS27AP13-201ENST00000498403 237 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 HMGB3P15-201ENST00000507326 574 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 RPL12P22-201ENST00000519073 490 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DMAP28067 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 SYF2P1-201ENST00000550658 413 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC023158.1-201ENST00000561632 1025 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 MIR6719-201ENST00000622428 87 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC073530.2-201ENST00000623987 261 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 AL732372.2-225ENST00000642124 456 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 MTND4P34-201ENST00000572715 1371 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DMAP28067 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DMAP28067 AC118273.1-201ENST00000525324 3006 ntBASIC3.19□□□□□ -1.9
HLA-DMAP28067 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DMAP28067 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms