Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN3P26045 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN3P26045 AC006011.1-201ENST00000442758 349 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.22□□□□□ -1.73
PTPN3P26045 DUXAP8-207ENST00000456786 622 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 RPL36AP13-201ENST00000457490 317 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.22□□□□□ -1.73
PTPN3P26045 SNORD108-201ENST00000459332 71 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 NAP1L1P3-201ENST00000462291 880 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 AC146507.1-201ENST00000468335 354 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN3P26045 AC087385.1-201ENST00000475062 312 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN3P26045 AC093752.1-206ENST00000511823 336 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 SNORA19.3-201ENST00000516165 130 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 RNA5SP154-201ENST00000516193 111 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 RN7SKP277-201ENST00000516895 283 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 MTND2P32-201ENST00000521584 1038 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN3P26045 C1GALT1P3-201ENST00000522049 819 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN3P26045 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.22□□□□□ -1.73
PTPN3P26045 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN3P26045 BPTFP1-201ENST00000579209 492 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN3P26045 MIR3138-201ENST00000585238 82 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN3P26045 AP001542.2-201ENST00000593141 364 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPN3P26045 AC008687.2-201ENST00000597865 520 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 AC012603.1-201ENST00000606424 528 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 MIR6748-201ENST00000610433 71 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 DUXAP10-204ENST00000612052 616 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPN3P26045 LARP1BP1-201ENST00000506036 1359 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 NMD3P1-201ENST00000439704 1488 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 MTND5P28-201ENST00000438005 1594 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN3P26045 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN3P26045 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN3P26045 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN3P26045 PNPT1P2-201ENST00000456768 2050 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 AC116667.1-201ENST00000604855 2072 ntBASIC4.22□□□□□ -1.73
PTPN3P26045 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPN3P26045 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PTPN3P26045 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN3P26045 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN3P26045 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN3P26045 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN3P26045 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN3P26045 MIR93-201ENST00000385024 80 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 MIR16-1-201ENST00000385271 89 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 MTCO2P31-201ENST00000402702 684 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 AC016397.1-201ENST00000412463 242 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 PGBD4P8-201ENST00000412993 562 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 BTF3P8-201ENST00000414577 526 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 MTCO2P23-201ENST00000425216 680 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 OSTCP5-201ENST00000425293 453 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 PSMA2P3-201ENST00000429685 675 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 ELOCP18-201ENST00000434209 337 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC073143.1-201ENST00000436316 395 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 ELOCP8-201ENST00000439309 332 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 ELOCP15-201ENST00000442090 332 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN3P26045 RPL29P29-201ENST00000448725 423 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 BX276092.4-201ENST00000452056 248 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN3P26045 PRDX3P4-201ENST00000470828 747 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 UQCRHP4-201ENST00000471686 272 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 AP000893.1-201ENST00000474462 794 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN3P26045 KRT19P6-201ENST00000510983 209 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN3P26045 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC110760.3-202ENST00000515177 371 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.21□□□□□ -1.74
PTPN3P26045 DEFB130C-202ENST00000530001 230 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 LRRC6P1-201ENST00000532188 885 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.21□□□□□ -1.74
PTPN3P26045 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPN3P26045 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC079171.1-201ENST00000568788 914 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 RPL23AP87-202ENST00000573039 466 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
PTPN3P26045 AC119501.1-201ENST00000603646 475 ntBASIC4.21□□□□□ -1.74
PTPN3P26045 RNA5SP108-201ENST00000605921 117 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms