Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFP01375 RNA5SP197-201ENST00000363357 119 ntBASIC3.3□□□□□ -1.88
TNFP01375 SNORA62.2-201ENST00000364672 152 ntBASIC3.3□□□□□ -1.88
TNFP01375 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFP01375 MIR1183-201ENST00000408856 89 ntBASIC3.3□□□□□ -1.88
TNFP01375 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFP01375 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFP01375 UBE2V1P1-201ENST00000430836 445 ntBASIC3.3□□□□□ -1.88
TNFP01375 AC091862.1-201ENST00000438016 1100 ntBASIC3.3□□□□□ -1.88
TNFP01375 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.3□□□□□ -1.88
TNFP01375 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFP01375 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.3□□□□□ -1.88
TNFP01375 OR4A2P-201ENST00000527276 913 ntBASIC3.3□□□□□ -1.88
TNFP01375 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFP01375 ZNF415P1-201ENST00000582279 1166 ntBASIC3.3□□□□□ -1.88
TNFP01375 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFP01375 AC067852.3-201ENST00000589177 561 ntBASIC3.3□□□□□ -1.88
TNFP01375 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFP01375 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.3□□□□□ -1.88
TNFP01375 AL606834.2-201ENST00000602954 668 ntBASIC3.3□□□□□ -1.88
TNFP01375 AC079880.2-201ENST00000603790 1213 ntBASIC3.3□□□□□ -1.88
TNFP01375 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.3□□□□□ -1.88
TNFP01375 AL354976.1-201ENST00000613843 387 ntBASIC3.3□□□□□ -1.88
TNFP01375 MIR7112-201ENST00000616126 65 ntBASIC3.3□□□□□ -1.88
TNFP01375 AL356321.1-201ENST00000621360 228 ntBASIC3.3□□□□□ -1.88
TNFP01375 AC244205.2-202ENST00000635781 342 ntBASIC3.3□□□□□ -1.88
TNFP01375 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.3□□□□□ -1.88
TNFP01375 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFP01375 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFP01375 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TNFP01375 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
TNFP01375 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFP01375 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TNFP01375 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TNFP01375 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFP01375 AL513302.2-201ENST00000562313 1842 ntBASIC3.29□□□□□ -1.88
TNFP01375 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFP01375 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFP01375 RHEBP3-201ENST00000411920 351 ntBASIC3.29□□□□□ -1.88
TNFP01375 RPL7P53-201ENST00000421245 739 ntBASIC3.29□□□□□ -1.88
TNFP01375 AJ239321.1-201ENST00000424255 564 ntBASIC3.29□□□□□ -1.88
TNFP01375 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFP01375 AP000936.3-201ENST00000438127 255 ntBASIC3.29□□□□□ -1.88
TNFP01375 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFP01375 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFP01375 AC008264.1-201ENST00000447612 367 ntBASIC3.29□□□□□ -1.88
TNFP01375 MTCO3P16-201ENST00000454456 754 ntBASIC3.29□□□□□ -1.88
TNFP01375 RPL21P13-201ENST00000488305 481 ntBASIC3.29□□□□□ -1.88
TNFP01375 AC021678.1-201ENST00000505195 936 ntBASIC3.29□□□□□ -1.88
TNFP01375 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
TNFP01375 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFP01375 AC010285.3-201ENST00000511668 676 ntBASIC3.29□□□□□ -1.88
TNFP01375 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFP01375 AC023141.12-201ENST00000512399 199 ntBASIC3.29□□□□□ -1.88
TNFP01375 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
TNFP01375 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFP01375 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFP01375 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFP01375 AL121576.1-201ENST00000556055 276 ntBASIC3.29□□□□□ -1.88
TNFP01375 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.29□□□□□ -1.88
TNFP01375 AC015917.1-201ENST00000579654 510 ntBASIC3.29□□□□□ -1.88
TNFP01375 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.29□□□□□ -1.88
TNFP01375 AC009303.3-201ENST00000591103 736 ntBASIC3.29□□□□□ -1.88
TNFP01375 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFP01375 AL160281.1-201ENST00000605307 311 ntBASIC3.29□□□□□ -1.88
TNFP01375 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.29□□□□□ -1.88
TNFP01375 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.29□□□□□ -1.88
TNFP01375 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TNFP01375 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
TNFP01375 CR382285.2-201ENST00000624662 1495 ntBASIC3.28□□□□□ -1.88
TNFP01375 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.28□□□□□ -1.88
TNFP01375 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.28□□□□□ -1.88
TNFP01375 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TNFP01375 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
TNFP01375 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TNFP01375 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.28□□□□□ -1.88
TNFP01375 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TNFP01375 RPL5P24-201ENST00000463742 885 ntBASIC3.28□□□□□ -1.88
TNFP01375 RPL7P38-201ENST00000488396 739 ntBASIC3.28□□□□□ -1.88
TNFP01375 DSTNP2-201ENST00000504533 515 ntBASIC3.28□□□□□ -1.88
TNFP01375 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.28□□□□□ -1.88
TNFP01375 FTH1P9-201ENST00000513251 355 ntBASIC3.28□□□□□ -1.88
TNFP01375 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFP01375 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFP01375 IGKV2D-23-201ENST00000518179 286 ntBASIC3.28□□□□□ -1.88
TNFP01375 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFP01375 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFP01375 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFP01375 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFP01375 GTF2IP8-201ENST00000560687 584 ntBASIC3.28□□□□□ -1.88
TNFP01375 YPEL5P2-201ENST00000605553 359 ntBASIC3.28□□□□□ -1.88
TNFP01375 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TNFP01375 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.28□□□□□ -1.88
TNFP01375 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.28□□□□□ -1.88
TNFP01375 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TNFP01375 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TNFP01375 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
TNFP01375 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TNFP01375 CR383658.2-201ENST00000547576 1525 ntBASIC3.28□□□□□ -1.88
TNFP01375 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms