Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.28□□□□□ -1.72
LDLRP01130 MIR513A2-201ENST00000385249 127 ntBASIC4.28□□□□□ -1.72
LDLRP01130 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
LDLRP01130 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.28□□□□□ -1.72
LDLRP01130 MTCO1P56-201ENST00000401674 224 ntBASIC4.28□□□□□ -1.72
LDLRP01130 HNRNPDP2-201ENST00000406475 478 ntBASIC4.28□□□□□ -1.72
LDLRP01130 RNU2-6P-201ENST00000411404 190 ntBASIC4.28□□□□□ -1.72
LDLRP01130 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.28□□□□□ -1.72
LDLRP01130 AC062016.2-201ENST00000420950 676 ntBASIC4.28□□□□□ -1.72
LDLRP01130 OR5AW1P-201ENST00000426334 1006 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AL451062.2-201ENST00000427515 271 ntBASIC4.28□□□□□ -1.72
LDLRP01130 RPL21P110-201ENST00000433345 446 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.28□□□□□ -1.72
LDLRP01130 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.28□□□□□ -1.72
LDLRP01130 EEF1A1P1-201ENST00000447052 739 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC239809.1-201ENST00000450470 217 ntBASIC4.28□□□□□ -1.72
LDLRP01130 RPL37P3-201ENST00000456825 293 ntBASIC4.28□□□□□ -1.72
LDLRP01130 TPTE2P5-203ENST00000458118 728 ntBASIC4.28□□□□□ -1.72
LDLRP01130 NAP1L1P3-201ENST00000462291 880 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.28□□□□□ -1.72
LDLRP01130 AC134050.1-201ENST00000495088 933 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC020593.1-201ENST00000507399 299 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC091868.1-201ENST00000508746 304 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC007016.1-201ENST00000512110 244 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.28□□□□□ -1.72
LDLRP01130 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.28□□□□□ -1.72
LDLRP01130 MIR2116-201ENST00000517221 80 ntBASIC4.28□□□□□ -1.72
LDLRP01130 DEFB130C-202ENST00000530001 230 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.28□□□□□ -1.72
LDLRP01130 AC084783.1-201ENST00000565846 910 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.28□□□□□ -1.72
LDLRP01130 MIR4429-201ENST00000580105 73 ntBASIC4.28□□□□□ -1.72
LDLRP01130 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LDLRP01130 AC002487.1-201ENST00000604565 994 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC010201.1-201ENST00000605051 540 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC245389.1-201ENST00000605141 529 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC007390.2-201ENST00000606229 3803 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AP000238.1-201ENST00000608759 426 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC010975.3-201ENST00000618727 978 ntBASIC4.28□□□□□ -1.72
LDLRP01130 AC018926.3-201ENST00000618841 406 ntBASIC4.28□□□□□ -1.72
LDLRP01130 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.28□□□□□ -1.72
LDLRP01130 AC105074.1-201ENST00000623380 3095 ntBASIC4.28□□□□□ -1.72
LDLRP01130 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.28□□□□□ -1.72
LDLRP01130 A2MP1-204ENST00000566278 4130 ntBASIC4.28□□□□□ -1.72
LDLRP01130 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.28□□□□□ -1.72
LDLRP01130 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.28□□□□□ -1.72
LDLRP01130 AL391684.1-202ENST00000641293 1636 ntBASIC4.28□□□□□ -1.72
LDLRP01130 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
LDLRP01130 AC005261.4-201ENST00000600047 1385 ntBASIC4.27□□□□□ -1.73
LDLRP01130 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LDLRP01130 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
LDLRP01130 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.27□□□□□ -1.73
LDLRP01130 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LDLRP01130 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
LDLRP01130 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LDLRP01130 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LDLRP01130 SNORD74.4-201ENST00000364129 80 ntBASIC4.27□□□□□ -1.73
LDLRP01130 OR1L1-202ENST00000373686 1083 ntBASIC4.27□□□□□ -1.73
LDLRP01130 RNU1-63P-201ENST00000383902 164 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AL450992.3-201ENST00000413192 568 ntBASIC4.27□□□□□ -1.73
LDLRP01130 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.27□□□□□ -1.73
LDLRP01130 RAD23BP1-201ENST00000421404 1227 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AC009965.2-201ENST00000425328 970 ntBASIC4.27□□□□□ -1.73
LDLRP01130 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.27□□□□□ -1.73
LDLRP01130 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.27□□□□□ -1.73
LDLRP01130 AL353748.1-201ENST00000440753 474 ntBASIC4.27□□□□□ -1.73
LDLRP01130 Z95327.1-201ENST00000446082 482 ntBASIC4.27□□□□□ -1.73
LDLRP01130 RPL7P31-201ENST00000450192 724 ntBASIC4.27□□□□□ -1.73
LDLRP01130 ZNF886P-201ENST00000450781 723 ntBASIC4.27□□□□□ -1.73
LDLRP01130 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LDLRP01130 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LDLRP01130 SNORD11.1-201ENST00000459482 85 ntBASIC4.27□□□□□ -1.73
LDLRP01130 PRDX3P4-201ENST00000470828 747 ntBASIC4.27□□□□□ -1.73
LDLRP01130 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.27□□□□□ -1.73
LDLRP01130 AC091167.1-201ENST00000492017 396 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.27□□□□□ -1.73
LDLRP01130 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.27□□□□□ -1.73
LDLRP01130 MTND1P22-201ENST00000510572 951 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AC008562.1-201ENST00000521763 330 ntBASIC4.27□□□□□ -1.73
LDLRP01130 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LDLRP01130 CYCSP29-201ENST00000533731 318 ntBASIC4.27□□□□□ -1.73
LDLRP01130 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.27□□□□□ -1.73
LDLRP01130 OR4U1P-201ENST00000554958 912 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.27□□□□□ -1.73
LDLRP01130 AC044913.1-201ENST00000557200 430 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.27□□□□□ -1.73
LDLRP01130 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.27□□□□□ -1.73
LDLRP01130 MIR3138-201ENST00000585238 82 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.27□□□□□ -1.73
LDLRP01130 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.27□□□□□ -1.73
LDLRP01130 AC008782.1-201ENST00000603386 430 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AL358072.1-201ENST00000604156 575 ntBASIC4.27□□□□□ -1.73
LDLRP01130 Z94722.1-201ENST00000604328 474 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AL392112.1-201ENST00000605115 829 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AC092954.1-201ENST00000609121 445 ntBASIC4.27□□□□□ -1.73
LDLRP01130 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.27□□□□□ -1.73
LDLRP01130 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AL049536.1-201ENST00000625043 744 ntBASIC4.27□□□□□ -1.73
LDLRP01130 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.27□□□□□ -1.73
LDLRP01130 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms