Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.12□□□□□ -1.75
TO15178 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
TO15178 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
TO15178 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TO15178 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TO15178 RNA5SP307-201ENST00000362863 116 ntBASIC4.12□□□□□ -1.75
TO15178 RNU6-582P-201ENST00000362989 107 ntBASIC4.12□□□□□ -1.75
TO15178 RNU6-1066P-201ENST00000363573 105 ntBASIC4.12□□□□□ -1.75
TO15178 RNU6-444P-201ENST00000383988 108 ntBASIC4.12□□□□□ -1.75
TO15178 SNORD116-23-201ENST00000384645 92 ntBASIC4.12□□□□□ -1.75
TO15178 MIR513B-201ENST00000385136 84 ntBASIC4.12□□□□□ -1.75
TO15178 SNORD96B-201ENST00000386148 79 ntBASIC4.12□□□□□ -1.75
TO15178 SNORD65.1-201ENST00000390889 71 ntBASIC4.12□□□□□ -1.75
TO15178 RNU6-1300P-201ENST00000391046 108 ntBASIC4.12□□□□□ -1.75
TO15178 HDGFP1-201ENST00000405943 252 ntBASIC4.12□□□□□ -1.75
TO15178 AL133264.1-201ENST00000407157 562 ntBASIC4.12□□□□□ -1.75
TO15178 RNA5SP104-201ENST00000410989 118 ntBASIC4.12□□□□□ -1.75
TO15178 AC008280.1-201ENST00000418851 412 ntBASIC4.12□□□□□ -1.75
TO15178 HMGB1P49-201ENST00000418882 569 ntBASIC4.12□□□□□ -1.75
TO15178 AL356387.2-201ENST00000422272 243 ntBASIC4.12□□□□□ -1.75
TO15178 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.12□□□□□ -1.75
TO15178 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.12□□□□□ -1.75
TO15178 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.12□□□□□ -1.75
TO15178 AL513175.1-201ENST00000431492 780 ntBASIC4.12□□□□□ -1.75
TO15178 AC114495.1-201ENST00000441274 436 ntBASIC4.12□□□□□ -1.75
TO15178 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.12□□□□□ -1.75
TO15178 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.12□□□□□ -1.75
TO15178 RN7SL738P-201ENST00000470264 297 ntBASIC4.12□□□□□ -1.75
TO15178 RPS3AP6-201ENST00000484430 795 ntBASIC4.12□□□□□ -1.75
TO15178 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.12□□□□□ -1.75
TO15178 AC092045.1-201ENST00000495716 1231 ntBASIC4.12□□□□□ -1.75
TO15178 AC114322.1-201ENST00000506771 926 ntBASIC4.12□□□□□ -1.75
TO15178 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.12□□□□□ -1.75
TO15178 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.12□□□□□ -1.75
TO15178 RN7SKP287-201ENST00000516546 266 ntBASIC4.12□□□□□ -1.75
TO15178 RNU6-885P-201ENST00000516607 104 ntBASIC4.12□□□□□ -1.75
TO15178 RN7SKP234-201ENST00000517173 224 ntBASIC4.12□□□□□ -1.75
TO15178 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.12□□□□□ -1.75
TO15178 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TO15178 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.12□□□□□ -1.75
TO15178 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TO15178 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TO15178 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TO15178 CR383656.6-201ENST00000550518 394 ntBASIC4.12□□□□□ -1.75
TO15178 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.12□□□□□ -1.75
TO15178 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TO15178 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.12□□□□□ -1.75
TO15178 MIR4715-201ENST00000584117 79 ntBASIC4.12□□□□□ -1.75
TO15178 VN1R79P-201ENST00000593540 513 ntBASIC4.12□□□□□ -1.75
TO15178 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.12□□□□□ -1.75
TO15178 AC093424.1-201ENST00000604999 338 ntBASIC4.12□□□□□ -1.75
TO15178 AC010201.1-201ENST00000605051 540 ntBASIC4.12□□□□□ -1.75
TO15178 AL354760.1-201ENST00000608357 643 ntBASIC4.12□□□□□ -1.75
TO15178 AC078899.5-201ENST00000612475 178 ntBASIC4.12□□□□□ -1.75
TO15178 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TO15178 AC022509.4-201ENST00000621404 572 ntBASIC4.12□□□□□ -1.75
TO15178 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TO15178 AP002782.1-201ENST00000623107 614 ntBASIC4.12□□□□□ -1.75
TO15178 AL512506.2-201ENST00000624472 458 ntBASIC4.12□□□□□ -1.75
TO15178 AC068620.4-201ENST00000636730 1182 ntBASIC4.12□□□□□ -1.75
TO15178 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.12□□□□□ -1.75
TO15178 DCAF13P1-201ENST00000495256 1330 ntBASIC4.12□□□□□ -1.75
TO15178 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.12□□□□□ -1.75
TO15178 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.12□□□□□ -1.75
TO15178 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.11□□□□□ -1.75
TO15178 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.11□□□□□ -1.75
TO15178 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.11□□□□□ -1.75
TO15178 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TO15178 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TO15178 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TO15178 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.11□□□□□ -1.75
TO15178 RNU6-115P-201ENST00000364310 107 ntBASIC4.11□□□□□ -1.75
TO15178 RNA5SP513-201ENST00000364648 118 ntBASIC4.11□□□□□ -1.75
TO15178 RNU4-28P-201ENST00000364739 141 ntBASIC4.11□□□□□ -1.75
TO15178 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.11□□□□□ -1.75
TO15178 MIR3065-201ENST00000390137 79 ntBASIC4.11□□□□□ -1.75
TO15178 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TO15178 RNU6-1242P-201ENST00000391052 103 ntBASIC4.11□□□□□ -1.75
TO15178 DSTNP4-201ENST00000399472 474 ntBASIC4.11□□□□□ -1.75
TO15178 FABP12P1-201ENST00000401911 322 ntBASIC4.11□□□□□ -1.75
TO15178 AL121978.1-201ENST00000402778 359 ntBASIC4.11□□□□□ -1.75
TO15178 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TO15178 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.11□□□□□ -1.75
TO15178 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.11□□□□□ -1.75
TO15178 GTF2IP23-201ENST00000423746 351 ntBASIC4.11□□□□□ -1.75
TO15178 CENPIP1-201ENST00000425713 902 ntBASIC4.11□□□□□ -1.75
TO15178 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.11□□□□□ -1.75
TO15178 AC093155.1-201ENST00000440164 826 ntBASIC4.11□□□□□ -1.75
TO15178 CEACAMP9-201ENST00000442990 513 ntBASIC4.11□□□□□ -1.75
TO15178 PTENP1-201ENST00000447117 1215 ntBASIC4.11□□□□□ -1.75
TO15178 AL034418.1-201ENST00000448675 860 ntBASIC4.11□□□□□ -1.75
TO15178 COX6CP18-201ENST00000448769 222 ntBASIC4.11□□□□□ -1.75
TO15178 NDUFA5P7-201ENST00000452914 242 ntBASIC4.11□□□□□ -1.75
TO15178 DDX39BP2-208ENST00000453923 258 ntBASIC4.11□□□□□ -1.75
TO15178 RPL5P32-201ENST00000454085 879 ntBASIC4.11□□□□□ -1.75
TO15178 NDUFA12P1-201ENST00000455914 406 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms