Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC092608.3-201ENST00000625017 386 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC026951.1-201ENST00000559530 2459 ntBASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
TRBV5-4A0A0C4DH59 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 MFSD8-220ENST00000641243 1422 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC134882.1-201ENST00000603738 1676 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 MTATP6P31-201ENST00000406985 692 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 RNU6-628P-201ENST00000410675 107 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 RN7SKP263-201ENST00000411194 309 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC092809.1-201ENST00000441469 474 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL929288.2-201ENST00000446368 407 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AP000942.1-201ENST00000463969 747 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC006511.1-201ENST00000470614 315 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 RN7SL323P-201ENST00000494712 295 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC023050.1-201ENST00000498198 304 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 RAC1P2-201ENST00000511164 579 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC119751.1-201ENST00000513357 765 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 RNU6-276P-201ENST00000516114 96 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 RNA5SP164-201ENST00000516533 110 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC104417.1-201ENST00000523974 751 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC022882.1-201ENST00000532142 501 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC022916.3-201ENST00000592961 742 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC096947.1-201ENST00000603233 470 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC073387.2-201ENST00000604797 784 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC090912.3-201ENST00000609775 533 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC026368.1-201ENST00000614934 690 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL354798.1-201ENST00000622505 329 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 OR4G3P-201ENST00000633500 913 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL353743.4-201ENST00000422653 1547 ntBASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.79□□□□□ -1.8
TRBV5-4A0A0C4DH59 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 RN7SKP280-201ENST00000364196 304 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 SNORA3.3-201ENST00000408712 125 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 RNU2-6P-201ENST00000411404 190 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC106883.1-201ENST00000418805 562 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 USP9YP21-201ENST00000420603 432 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 AL353597.2-202ENST00000434901 373 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 SNORA71B-202ENST00000439232 272 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC098824.1-201ENST00000453565 980 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 AC068587.1-201ENST00000483613 781 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 BTF3L4P4-201ENST00000506381 449 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 RNU6-415P-201ENST00000516252 97 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 RN7SKP283-201ENST00000517197 270 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 TOMM20P2-201ENST00000540082 421 ntBASIC3.78□□□□□ -1.8
TRBV5-4A0A0C4DH59 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms