Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC016559.2-201ENST00000510759 359 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU6-976P-201ENST00000516086 111 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 RNA5SP454-201ENST00000517231 127 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AP000857.1-201ENST00000532151 543 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC005519.1-201ENST00000554490 601 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 RN7SL32P-201ENST00000580514 281 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC069061.3-201ENST00000582254 823 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 BNIP3P25-201ENST00000596023 559 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC114477.1-201ENST00000605097 605 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC011373.1-201ENST00000607270 237 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC022893.3-201ENST00000607665 437 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC133644.2-201ENST00000608142 540 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AC083806.3-201ENST00000614016 455 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AL157817.1-201ENST00000614264 790 ntBASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PCDHGA11Q9Y5H2 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AL445437.1-201ENST00000623157 3087 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC010894.1-201ENST00000313760 361 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU1-5P-201ENST00000362684 144 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU6-1188P-201ENST00000363795 107 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU1-130P-201ENST00000363930 160 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU6-1318P-201ENST00000365389 103 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU6-1293P-201ENST00000384077 107 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 Y_RNA.482-201ENST00000384377 111 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 Y_RNA.618-201ENST00000410949 107 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 MTCYBP9-201ENST00000431021 303 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 RPL36AP6-201ENST00000435770 321 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC106872.2-201ENST00000494303 480 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC022206.1-201ENST00000495947 347 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 RPS27P27-201ENST00000498779 255 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 MTCO2P24-201ENST00000515611 426 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 IGKV2-19-201ENST00000518132 283 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 OR5D15P-201ENST00000531671 942 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 CHEK2P2-201ENST00000554701 672 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AL118558.2-201ENST00000556294 238 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 RN7SL802P-201ENST00000577858 299 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AL355598.1-201ENST00000604169 202 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC010680.4-201ENST00000605334 543 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 AC113194.1-201ENST00000606037 500 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 RNU6-156P-201ENST00000621869 107 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 SMG1P5-202ENST00000529428 4219 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 SMG1P2-201ENST00000566127 4221 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 PANDAR-201ENST00000629595 1506 ntBASIC6.25□□□□□ -1.41
PCDHGA11Q9Y5H2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 PROS2P-201ENST00000474651 1951 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 MTND5P19-201ENST00000424872 1794 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 AC091046.3-201ENST00000631455 1574 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 MTND4P1-201ENST00000457501 1466 ntBASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDHGA11Q9Y5H2 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms