Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 RNY1P12-201ENST00000364251 105 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AL109941.1-201ENST00000401925 229 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 UBE2V1P14-201ENST00000415815 558 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC234782.4-201ENST00000417646 1048 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 RGS17P1-201ENST00000423358 553 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 RBMY2QP-201ENST00000429799 1147 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 RPL23AP30-201ENST00000432419 501 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 GTF2IP13-201ENST00000438487 386 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 RPS15AP9-201ENST00000439856 381 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 SLC25A18P1-201ENST00000449385 454 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 GAPDHP14-201ENST00000450472 937 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 RPS20P32-201ENST00000456044 356 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC104164.1-201ENST00000460282 590 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 RPL21P71-201ENST00000465598 459 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 BTF3P13-201ENST00000513224 490 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 Y_RNA.691-201ENST00000516611 103 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 OR4R1P-201ENST00000529879 463 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 DNAJC8P1-201ENST00000554535 372 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 HMGB1P6-201ENST00000569046 646 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC019322.1-201ENST00000571869 389 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC006270.2-201ENST00000578523 652 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC100830.2-201ENST00000581636 240 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 SNRPGP17-201ENST00000603780 214 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC080078.3-201ENST00000605407 463 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC105074.1-201ENST00000623380 3095 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AC114546.3-201ENST00000623582 1734 ntBASIC7.16□□□□□ -1.26
ZC3H4Q9UPT8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 THUMPD3P1-201ENST00000506556 1480 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AL591848.4-201ENST00000567832 3472 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 SNORD42.2-201ENST00000365570 69 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-730P-201ENST00000383954 104 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 MIR433-201ENST00000384837 93 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 RNU6-907P-201ENST00000390924 102 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 SNORD37.1-201ENST00000390968 65 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 HMGB1P17-201ENST00000403495 628 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 OR1AA1P-201ENST00000419597 916 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC007283.2-201ENST00000424739 197 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AL353777.1-201ENST00000425552 326 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC104837.2-201ENST00000427236 424 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC006466.1-201ENST00000438721 289 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 FAM103A2P-201ENST00000444122 354 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AL022237.1-201ENST00000446663 358 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AL035551.1-201ENST00000446931 348 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AL163540.1-201ENST00000485382 386 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC026464.5-201ENST00000562497 722 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 FRG2DP-202ENST00000566967 323 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC119403.2-201ENST00000590960 598 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC010591.1-201ENST00000603941 649 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC145423.1-201ENST00000605712 336 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 AC133644.2-201ENST00000608142 540 ntBASIC7.15□□□□□ -1.26
ZC3H4Q9UPT8 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ZC3H4Q9UPT8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms