Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 MIR486-1-201ENST00000612171 68 ntBASIC5.08□□□□□ -1.6
SCAPERQ9BY12 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 AL031985.3-201ENST00000565390 2449 ntBASIC5.08□□□□□ -1.6
SCAPERQ9BY12 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SCAPERQ9BY12 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 RNU6-7-201ENST00000364784 107 ntBASIC5.07□□□□□ -1.6
SCAPERQ9BY12 RNU6-8-201ENST00000365467 107 ntBASIC5.07□□□□□ -1.6
SCAPERQ9BY12 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 RNU1-89P-201ENST00000384592 164 ntBASIC5.07□□□□□ -1.6
SCAPERQ9BY12 MTND2P25-201ENST00000449028 610 ntBASIC5.07□□□□□ -1.6
SCAPERQ9BY12 HMGB1P5-202ENST00000451497 985 ntBASIC5.07□□□□□ -1.6
SCAPERQ9BY12 AL133477.1-201ENST00000457472 514 ntBASIC5.07□□□□□ -1.6
SCAPERQ9BY12 RN7SL863P-201ENST00000462370 296 ntBASIC5.07□□□□□ -1.6
SCAPERQ9BY12 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 KCTD9P6-201ENST00000522306 950 ntBASIC5.07□□□□□ -1.6
SCAPERQ9BY12 AL590240.3-201ENST00000621416 943 ntBASIC5.07□□□□□ -1.6
SCAPERQ9BY12 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SCAPERQ9BY12 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 RNA5SP502-201ENST00000362694 119 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 MIR708-201ENST00000390708 88 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AC027309.2-201ENST00000520566 192 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AC141257.3-201ENST00000572906 215 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AL162713.1-201ENST00000604480 262 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 MTCO1P24-201ENST00000515438 1558 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 ARF4P3-201ENST00000397387 509 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AC007899.1-201ENST00000412776 775 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 IFNNP1-201ENST00000429219 553 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 ATP5C1P1-201ENST00000441945 895 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AC105918.1-201ENST00000474399 838 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 APOOP4-201ENST00000513530 597 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AC020914.4-201ENST00000597690 277 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 IGHV3-29-201ENST00000604817 344 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 BRDTP1-201ENST00000605735 677 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.06□□□□□ -1.6
SCAPERQ9BY12 AC007998.5-201ENST00000622938 237 ntBASIC5.06□□□□□ -1.6
SCAPERQ9BY12 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 HMGN2P8-201ENST00000391458 268 ntBASIC5.05□□□□□ -1.6
SCAPERQ9BY12 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 RPL35AP12-201ENST00000425362 338 ntBASIC5.05□□□□□ -1.6
SCAPERQ9BY12 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 KC877373.1-201ENST00000479066 408 ntBASIC5.05□□□□□ -1.6
SCAPERQ9BY12 AP000926.4-201ENST00000527351 454 ntBASIC5.05□□□□□ -1.6
SCAPERQ9BY12 AC135001.1-201ENST00000544546 283 ntBASIC5.05□□□□□ -1.6
SCAPERQ9BY12 HIGD1AP1-201ENST00000550979 275 ntBASIC5.05□□□□□ -1.6
SCAPERQ9BY12 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.05□□□□□ -1.6
SCAPERQ9BY12 AL137790.1-201ENST00000634283 177 ntBASIC5.05□□□□□ -1.6
SCAPERQ9BY12 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 RNU6-729P-201ENST00000384399 107 ntBASIC5.04□□□□□ -1.6
SCAPERQ9BY12 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 AC140076.1-201ENST00000449897 361 ntBASIC5.04□□□□□ -1.6
SCAPERQ9BY12 AC004924.1-201ENST00000480160 781 ntBASIC5.04□□□□□ -1.6
SCAPERQ9BY12 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 AC087276.1-201ENST00000529659 480 ntBASIC5.04□□□□□ -1.6
SCAPERQ9BY12 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.04□□□□□ -1.6
SCAPERQ9BY12 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms