Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RN7SL629P-201ENST00000489622 285 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC108022.1-201ENST00000493466 478 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC025164.1-201ENST00000496249 478 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC098799.3-201ENST00000506095 438 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.49□□□□□ -1.85
VGLL1Q99990 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VGLL1Q99990 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.49□□□□□ -1.85
VGLL1Q99990 RNA5SP497-201ENST00000516081 97 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 RPL12P22-201ENST00000519073 490 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.49□□□□□ -1.85
VGLL1Q99990 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VGLL1Q99990 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.49□□□□□ -1.85
VGLL1Q99990 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VGLL1Q99990 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.49□□□□□ -1.85
VGLL1Q99990 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.49□□□□□ -1.85
VGLL1Q99990 HMGB3P26-201ENST00000560051 582 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC079171.1-201ENST00000568788 914 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC091178.1-203ENST00000584586 279 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC103881.1-201ENST00000603476 538 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC092653.1-201ENST00000608509 531 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AP004247.3-201ENST00000608682 624 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC078899.5-201ENST00000612475 178 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 MIR6729-201ENST00000618194 65 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC073348.1-201ENST00000623002 331 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC091931.1-201ENST00000623488 728 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AP002799.1-201ENST00000623552 423 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 BMS1P21-201ENST00000634565 365 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC116618.1-201ENST00000634617 774 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VGLL1Q99990 SAMMSON-226ENST00000642089 1582 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VGLL1Q99990 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
VGLL1Q99990 AC093535.2-201ENST00000624769 2326 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.49□□□□□ -1.85
VGLL1Q99990 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.49□□□□□ -1.85
VGLL1Q99990 CR381670.1-201ENST00000624291 1693 ntBASIC3.49□□□□□ -1.85
VGLL1Q99990 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VGLL1Q99990 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
VGLL1Q99990 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.48□□□□□ -1.85
VGLL1Q99990 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VGLL1Q99990 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.48□□□□□ -1.85
VGLL1Q99990 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 C4BPAP1-201ENST00000415474 1893 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 AC092104.1-201ENST00000497346 1441 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VGLL1Q99990 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VGLL1Q99990 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AL031577.2-201ENST00000404133 280 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.48□□□□□ -1.85
VGLL1Q99990 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AL591848.1-201ENST00000413092 322 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 MRPS36P1-201ENST00000421291 307 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.48□□□□□ -1.85
VGLL1Q99990 NANOGP6-201ENST00000429190 847 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AC129850.1-201ENST00000436203 508 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AL138878.2-201ENST00000440581 1241 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 RPS7P5-201ENST00000441482 581 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AL357520.1-201ENST00000441557 453 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AL591503.2-201ENST00000442314 1005 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 YWHAQP9-201ENST00000445891 512 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AC009961.3-201ENST00000449832 765 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.48□□□□□ -1.85
VGLL1Q99990 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AL133244.1-201ENST00000456007 258 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 RPL23AP65-201ENST00000475608 468 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 RPSAP50-201ENST00000481955 852 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 VPS26AP1-201ENST00000483197 979 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 RPS27P23-201ENST00000487608 251 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AC146944.2-203ENST00000502493 354 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AC139495.1-202ENST00000513164 354 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 HNRNPKP5-201ENST00000515300 253 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.48□□□□□ -1.85
VGLL1Q99990 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VGLL1Q99990 HMGN2P6-201ENST00000551091 273 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AC023161.2-201ENST00000551218 780 ntBASIC3.48□□□□□ -1.85
VGLL1Q99990 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.48□□□□□ -1.85
VGLL1Q99990 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms