Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RNA5SP44-201ENST00000410446 133 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 LIPT1P1-201ENST00000415870 1186 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 RPS6P12-201ENST00000432491 726 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 ISCA1P2-201ENST00000438679 421 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AL606490.8-201ENST00000441624 319 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AL591503.2-201ENST00000442314 1005 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 Z75741.1-201ENST00000446793 314 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AC115115.1-201ENST00000449927 248 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 BTF3P5-201ENST00000457252 467 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 RPL32P34-201ENST00000486380 400 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AL358832.1-201ENST00000497800 389 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 SCARNA20.6-201ENST00000517251 106 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 MIR2682-201ENST00000580305 110 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AC008507.1-201ENST00000587506 734 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AC004777.1-201ENST00000624317 287 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 AL133383.2-201ENST00000622958 2336 ntBASIC2.69□□□□□ -1.98
GAFA1Q96PS6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
GAFA1Q96PS6 OR11H5P-202ENST00000641612 1325 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 U3.19-201ENST00000390893 196 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 SKINT1L-201ENST00000401057 817 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 RNA5SP120-201ENST00000410900 112 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 RNA5SP107-201ENST00000411358 122 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AL451062.2-201ENST00000427515 271 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AC091862.1-201ENST00000438016 1100 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AC108078.3-201ENST00000502633 489 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AC138409.2-202ENST00000507274 458 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 SLC25A15P5-201ENST00000508033 253 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AC018797.3-201ENST00000513388 1241 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 MIR3944-201ENST00000581277 108 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AL606834.2-201ENST00000602954 668 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 SRGNP1-201ENST00000603392 451 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AC004825.2-201ENST00000616634 455 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AC091903.1-201ENST00000624322 454 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AC073476.4-201ENST00000628409 72 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 AC024341.1-201ENST00000526444 1552 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 CDY11P-201ENST00000447168 1651 ntBASIC2.68□□□□□ -1.98
GAFA1Q96PS6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
GAFA1Q96PS6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AL357520.1-201ENST00000441557 453 ntBASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 RPL6P9-201ENST00000466502 859 ntBASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC034236.1-201ENST00000469891 373 ntBASIC2.67□□□□□ -1.98
GAFA1Q96PS6 RN7SL809P-201ENST00000482040 297 ntBASIC2.67□□□□□ -1.98
GAFA1Q96PS6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC104027.1-201ENST00000521887 300 ntBASIC2.67□□□□□ -1.98
GAFA1Q96PS6 KCTD9P6-201ENST00000522306 950 ntBASIC2.67□□□□□ -1.98
GAFA1Q96PS6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC006518.1-201ENST00000541449 943 ntBASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 MIR5680-201ENST00000577577 84 ntBASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.67□□□□□ -1.98
GAFA1Q96PS6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms