Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 RNU6-492P-201ENST00000363035 104 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 SNORA4.1-201ENST00000364263 144 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS50Q96JG6 SUGT1P1-201ENST00000379514 476 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 MIR708-201ENST00000390708 88 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AL031577.2-201ENST00000404133 280 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 AP000580.1-201ENST00000404439 358 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 RPS4XP9-201ENST00000405151 780 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 RNU2-65P-201ENST00000410162 185 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 RNU6-920P-201ENST00000410926 92 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 PIGPP2-201ENST00000411569 458 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 CHEK2P3-201ENST00000416118 248 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC098826.1-201ENST00000433943 471 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AL034418.1-201ENST00000448675 860 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 MTCO3P16-201ENST00000454456 754 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC092324.1-201ENST00000468671 324 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 BX284632.1-201ENST00000478218 541 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 RPS6P4-201ENST00000494693 758 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 RPL12P22-201ENST00000519073 490 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AP001189.2-201ENST00000527320 189 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AP000811.1-201ENST00000603803 651 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC122108.2-201ENST00000611946 526 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC005332.6-201ENST00000613178 446 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC067931.1-201ENST00000624190 671 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS50Q96JG6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS50Q96JG6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS50Q96JG6 AC022031.1-201ENST00000585985 2593 ntBASIC4.75□□□□□ -1.65
VPS50Q96JG6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS50Q96JG6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS50Q96JG6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS50Q96JG6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS50Q96JG6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS50Q96JG6 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS50Q96JG6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS50Q96JG6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS50Q96JG6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 Z73965.1-201ENST00000623412 2297 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS50Q96JG6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS50Q96JG6 Y_RNA.77-201ENST00000362962 107 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 RNU6-984P-201ENST00000363236 109 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 SNORA51.8-201ENST00000384234 132 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 SNORD116-4-201ENST00000384733 96 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 MIR585-201ENST00000384887 94 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 RNA5SP372-201ENST00000390836 115 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 ATP5F1P4-201ENST00000397288 746 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 RPS3AP26-201ENST00000398259 784 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS50Q96JG6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 NPM1P11-201ENST00000417106 855 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC104837.2-201ENST00000427236 424 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS50Q96JG6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 DLGAP5P1-201ENST00000430307 464 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AL513175.1-201ENST00000431492 780 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC129850.1-201ENST00000436203 508 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC009961.3-201ENST00000449832 765 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 RPL23AP15-201ENST00000450202 459 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 OR6C5P-201ENST00000452388 923 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 AC091685.2-201ENST00000454924 864 ntBASIC4.74□□□□□ -1.65
VPS50Q96JG6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS50Q96JG6 RPS15AP1-201ENST00000457423 391 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms