Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MTND4LP25-201ENST00000570218 163 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.25□□□□□ -1.73
VMP1Q96GC9 MIR5096-201ENST00000583713 70 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VMP1Q96GC9 RPL12P25-202ENST00000598100 674 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 AC090181.2-201ENST00000602975 672 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 MTATP6P2-201ENST00000603319 678 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 AC008782.1-201ENST00000603386 430 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 AC025588.3-201ENST00000604182 274 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 AC002487.1-201ENST00000604565 994 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 AL354760.1-201ENST00000608357 643 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 AC090425.2-201ENST00000608818 501 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VMP1Q96GC9 AC112200.1-201ENST00000625015 234 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 MIR7641-1-201ENST00000627518 61 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 BX649567.1-201ENST00000642071 1134 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
VMP1Q96GC9 Z82217.1-201ENST00000625157 8149 ntBASIC4.25□□□□□ -1.73
VMP1Q96GC9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VMP1Q96GC9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 RNU6-207P-201ENST00000384137 107 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 RN7SKP167-201ENST00000411047 285 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 FAR2P2-201ENST00000413041 594 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 RPS12P10-201ENST00000427031 377 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 FO393414.1-201ENST00000428697 1184 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 MTCO1P54-201ENST00000430139 712 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 ELOCP18-201ENST00000434209 337 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 RPL23AP93-201ENST00000440847 484 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 ELOCP13-201ENST00000443934 329 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 SEPT14P24-201ENST00000447236 180 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AL133477.1-201ENST00000457472 514 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 RNU7-170P-201ENST00000459303 61 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 snoU13.3-201ENST00000459441 104 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC022034.3-201ENST00000471393 478 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC007537.2-201ENST00000472093 511 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 RAB9BP1-201ENST00000519581 626 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC084783.1-201ENST00000565846 910 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 CYP4A43P-201ENST00000568156 121 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 MIR4715-201ENST00000584117 79 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC068790.4-201ENST00000602474 263 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AL355812.1-201ENST00000603215 216 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC008745.1-201ENST00000604064 271 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 AL354976.1-201ENST00000613843 387 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC068880.4-201ENST00000623082 495 ntBASIC4.24□□□□□ -1.73
VMP1Q96GC9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VMP1Q96GC9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.24□□□□□ -1.73
VMP1Q96GC9 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VMP1Q96GC9 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VMP1Q96GC9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
VMP1Q96GC9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VMP1Q96GC9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VMP1Q96GC9 RNU6-263P-201ENST00000363811 107 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 RNU1-32P-201ENST00000363937 159 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VMP1Q96GC9 U1.1-201ENST00000384101 164 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 RNA5SP56-201ENST00000410277 118 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 RNU4-78P-201ENST00000410940 126 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.23□□□□□ -1.73
VMP1Q96GC9 UBTFL3-201ENST00000418934 1024 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VMP1Q96GC9 RPS27AP7-201ENST00000422792 455 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VMP1Q96GC9 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.23□□□□□ -1.73
VMP1Q96GC9 NDUFA5P7-201ENST00000452914 242 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 UBTFL6-201ENST00000477929 1024 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 RPS26P15-201ENST00000488067 348 ntBASIC4.23□□□□□ -1.73
VMP1Q96GC9 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms