Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.79□□□□□ -1.32
HLA-CQ95604 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.79□□□□□ -1.32
HLA-CQ95604 SALL1P1-201ENST00000438101 3837 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 AC099799.1-201ENST00000439809 192 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.79□□□□□ -1.32
HLA-CQ95604 AL392103.1-201ENST00000447000 198 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 AL034399.1-201ENST00000451535 380 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.79□□□□□ -1.32
HLA-CQ95604 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.79□□□□□ -1.32
HLA-CQ95604 AC112492.4-201ENST00000456549 352 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.79□□□□□ -1.32
HLA-CQ95604 RPL21P93-201ENST00000480465 489 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 AC093767.1-201ENST00000504523 156 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-CQ95604 AC104057.1-201ENST00000515547 497 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.79□□□□□ -1.32
HLA-CQ95604 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.79□□□□□ -1.32
HLA-CQ95604 RPA2P1-201ENST00000556557 721 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.79□□□□□ -1.32
HLA-CQ95604 AC005899.2-201ENST00000584353 90 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 Z98751.3-201ENST00000604447 521 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 RNA5SP440-201ENST00000612665 119 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 AC073488.2-201ENST00000631903 751 ntBASIC6.79□□□□□ -1.32
HLA-CQ95604 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HLA-CQ95604 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-CQ95604 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-CQ95604 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-CQ95604 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-CQ95604 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-CQ95604 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
HLA-CQ95604 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-CQ95604 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
HLA-CQ95604 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.79□□□□□ -1.32
HLA-CQ95604 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-CQ95604 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.79□□□□□ -1.32
HLA-CQ95604 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
HLA-CQ95604 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
HLA-CQ95604 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-CQ95604 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
HLA-CQ95604 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-CQ95604 Z97989.1-201ENST00000531702 2421 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 Y_RNA.404-201ENST00000383978 102 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 Y_RNA.576-201ENST00000384781 102 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 RPL6P29-201ENST00000414863 865 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-CQ95604 AC007562.1-201ENST00000421819 517 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AC064862.4-201ENST00000442180 334 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 SNORD97-201ENST00000459187 142 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 RPL21P8-201ENST00000465083 535 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AC103987.1-201ENST00000473394 348 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AC087879.1-201ENST00000474343 374 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AC005912.1-201ENST00000495392 255 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AC104806.1-201ENST00000508720 308 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AC016559.2-201ENST00000510759 359 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-CQ95604 AC114781.3-201ENST00000512083 142 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-CQ95604 Y_RNA.670-201ENST00000516255 105 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 RNA5SP438-201ENST00000516561 112 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.78□□□□□ -1.32
HLA-CQ95604 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-CQ95604 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 AC092447.9-201ENST00000603395 144 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-CQ95604 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.78□□□□□ -1.32
HLA-CQ95604 AC140479.2-201ENST00000421567 3130 ntBASIC6.78□□□□□ -1.32
HLA-CQ95604 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.78□□□□□ -1.32
HLA-CQ95604 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HLA-CQ95604 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.78□□□□□ -1.32
HLA-CQ95604 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
HLA-CQ95604 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC6.77□□□□□ -1.32
HLA-CQ95604 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
HLA-CQ95604 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.77□□□□□ -1.33
HLA-CQ95604 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HLA-CQ95604 RACGAP1P-201ENST00000550663 1879 ntBASIC6.77□□□□□ -1.33
HLA-CQ95604 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
HLA-CQ95604 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HLA-CQ95604 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HLA-CQ95604 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms