Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC090116.1-201ENST00000615679 446 ntBASIC3.98□□□□□ -1.77
PTP4A1Q93096 MIR6891-201ENST00000618788 93 ntBASIC3.98□□□□□ -1.77
PTP4A1Q93096 AP000720.1-201ENST00000625091 483 ntBASIC3.98□□□□□ -1.77
PTP4A1Q93096 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.98□□□□□ -1.77
PTP4A1Q93096 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.98□□□□□ -1.77
PTP4A1Q93096 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.98□□□□□ -1.77
PTP4A1Q93096 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTP4A1Q93096 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PTP4A1Q93096 GABPAP-201ENST00000419271 1356 ntBASIC3.98□□□□□ -1.77
PTP4A1Q93096 AC111188.2-201ENST00000529697 1387 ntBASIC3.98□□□□□ -1.77
PTP4A1Q93096 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.98□□□□□ -1.77
PTP4A1Q93096 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PTP4A1Q93096 AC066616.2-201ENST00000559334 1481 ntBASIC3.98□□□□□ -1.77
PTP4A1Q93096 AC097504.1-201ENST00000515103 2415 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTP4A1Q93096 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTP4A1Q93096 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTP4A1Q93096 MFSD8-242ENST00000641690 4199 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC010928.1-201ENST00000592477 1447 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AP001350.1-201ENST00000601906 1524 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTP4A1Q93096 OR4A15-201ENST00000314706 1035 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 SNORD6-201ENST00000365444 73 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 RNU6-761P-201ENST00000384148 107 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 SNORD116-23-201ENST00000384645 92 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 MIR659-201ENST00000384963 97 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AL035405.1-201ENST00000400795 710 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AL133264.1-201ENST00000407157 562 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 MIR1183-201ENST00000408856 89 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 RN7SKP106-201ENST00000410832 272 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 PTP4A1P7-201ENST00000423476 514 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 RPS12P10-201ENST00000427031 377 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 UBE2V1P3-201ENST00000439651 417 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AL162591.2-201ENST00000449634 317 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 RPL35AP28-201ENST00000459730 331 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 IGLV2-34-201ENST00000490007 283 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 TRAV31-201ENST00000502780 342 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC008837.1-201ENST00000511513 412 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 MIR2114-201ENST00000516645 80 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 IFITM8P-201ENST00000522529 394 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 PHBP17-201ENST00000528576 541 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AP003066.2-201ENST00000529375 555 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC044913.1-201ENST00000557200 430 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 ZNF971P-201ENST00000562068 1249 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 CYP4A43P-201ENST00000568156 121 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 MIR4644-201ENST00000579929 84 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC006116.7-201ENST00000590141 756 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC020914.4-201ENST00000597690 277 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC068620.3-201ENST00000602749 560 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AL133338.2-201ENST00000604292 736 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 HMGB1P50-201ENST00000605814 607 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AL161616.1-201ENST00000611867 286 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 RNU6-1192P-201ENST00000612197 107 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC100827.5-201ENST00000615883 426 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 RNU6-489P-201ENST00000618289 107 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC073968.1-201ENST00000618594 637 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC006065.6-201ENST00000625201 545 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 AC130650.2-201ENST00000618736 2403 ntBASIC3.97□□□□□ -1.77
PTP4A1Q93096 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTP4A1Q93096 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PTP4A1Q93096 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTP4A1Q93096 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
PTP4A1Q93096 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PTP4A1Q93096 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
PTP4A1Q93096 FAM35DP-201ENST00000323387 2712 ntBASIC3.96□□□□□ -1.78
PTP4A1Q93096 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTP4A1Q93096 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTP4A1Q93096 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTP4A1Q93096 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTP4A1Q93096 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTP4A1Q93096 RNU6-600P-201ENST00000362524 99 ntBASIC3.96□□□□□ -1.78
PTP4A1Q93096 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PTP4A1Q93096 AL138878.1-201ENST00000405131 347 ntBASIC3.96□□□□□ -1.78
PTP4A1Q93096 RNU2-71P-201ENST00000411395 189 ntBASIC3.96□□□□□ -1.78
PTP4A1Q93096 AL024507.1-201ENST00000412741 274 ntBASIC3.96□□□□□ -1.78
PTP4A1Q93096 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.96□□□□□ -1.78
PTP4A1Q93096 MTCO3P12-201ENST00000416718 547 ntBASIC3.96□□□□□ -1.78
PTP4A1Q93096 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.96□□□□□ -1.78
PTP4A1Q93096 MTCYBP32-201ENST00000427945 1084 ntBASIC3.96□□□□□ -1.78
PTP4A1Q93096 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms