Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS8Q8N3P4 IGLVIV-53-201ENST00000520107 367 ntBASIC5.01□□□□□ -1.61
VPS8Q8N3P4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
VPS8Q8N3P4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS8Q8N3P4 AC073476.4-201ENST00000628409 72 ntBASIC5.01□□□□□ -1.61
VPS8Q8N3P4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VPS8Q8N3P4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS8Q8N3P4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
VPS8Q8N3P4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS8Q8N3P4 PROS2P-201ENST00000474651 1951 ntBASIC5□□□□□ -1.61
VPS8Q8N3P4 MIR423-201ENST00000362201 94 ntBASIC5□□□□□ -1.61
VPS8Q8N3P4 AJ239321.1-201ENST00000424255 564 ntBASIC5□□□□□ -1.61
VPS8Q8N3P4 SEPT7P3-201ENST00000455017 621 ntBASIC5□□□□□ -1.61
VPS8Q8N3P4 RPL5P24-201ENST00000463742 885 ntBASIC5□□□□□ -1.61
VPS8Q8N3P4 RPS26P24-201ENST00000497656 331 ntBASIC5□□□□□ -1.61
VPS8Q8N3P4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5□□□□□ -1.61
VPS8Q8N3P4 KCTD9P6-201ENST00000522306 950 ntBASIC5□□□□□ -1.61
VPS8Q8N3P4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5□□□□□ -1.61
VPS8Q8N3P4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5□□□□□ -1.61
VPS8Q8N3P4 AC008507.1-201ENST00000587506 734 ntBASIC5□□□□□ -1.61
VPS8Q8N3P4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5□□□□□ -1.61
VPS8Q8N3P4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5□□□□□ -1.61
VPS8Q8N3P4 AF131215.7-201ENST00000602443 707 ntBASIC5□□□□□ -1.61
VPS8Q8N3P4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
VPS8Q8N3P4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5□□□□□ -1.61
VPS8Q8N3P4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 AL353678.1-201ENST00000422735 741 ntBASIC4.99□□□□□ -1.61
VPS8Q8N3P4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.99□□□□□ -1.61
VPS8Q8N3P4 AC015849.2-201ENST00000605738 409 ntBASIC4.99□□□□□ -1.61
VPS8Q8N3P4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 AL035425.3-201ENST00000564206 4996 ntBASIC4.99□□□□□ -1.61
VPS8Q8N3P4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS8Q8N3P4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS8Q8N3P4 RPL6P21-201ENST00000418672 846 ntBASIC4.98□□□□□ -1.61
VPS8Q8N3P4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS8Q8N3P4 AC105918.1-201ENST00000474399 838 ntBASIC4.98□□□□□ -1.61
VPS8Q8N3P4 AC017015.1-201ENST00000477387 286 ntBASIC4.98□□□□□ -1.61
VPS8Q8N3P4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS8Q8N3P4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS8Q8N3P4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS8Q8N3P4 AC018692.3-201ENST00000623929 123 ntBASIC4.98□□□□□ -1.61
VPS8Q8N3P4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS8Q8N3P4 HSFY1P1-201ENST00000423928 1178 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 RPS12P18-201ENST00000442381 270 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 AL671855.1-201ENST00000446875 1203 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 UBL5P2-201ENST00000583788 219 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 RNA5SP296-201ENST00000410523 111 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 HMGN1P18-201ENST00000457642 277 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 AC004801.2-202ENST00000463559 283 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 RPS29P2-201ENST00000479278 136 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 GMPSP1-201ENST00000514075 579 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 GTF2IP8-201ENST00000560687 584 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 AC106782.4-201ENST00000568264 210 ntBASIC4.97□□□□□ -1.61
VPS8Q8N3P4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS8Q8N3P4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS8Q8N3P4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS8Q8N3P4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.96□□□□□ -1.61
VPS8Q8N3P4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.96□□□□□ -1.61
VPS8Q8N3P4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS8Q8N3P4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS8Q8N3P4 RNU1-75P-201ENST00000347264 129 ntBASIC4.96□□□□□ -1.62
VPS8Q8N3P4 RPL7P28-201ENST00000437739 740 ntBASIC4.96□□□□□ -1.62
VPS8Q8N3P4 AC108078.3-201ENST00000502633 489 ntBASIC4.96□□□□□ -1.62
VPS8Q8N3P4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS8Q8N3P4 AC008885.1-201ENST00000514930 301 ntBASIC4.96□□□□□ -1.62
VPS8Q8N3P4 HIGD1AP18-201ENST00000520730 278 ntBASIC4.96□□□□□ -1.62
VPS8Q8N3P4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS8Q8N3P4 AC018552.3-201ENST00000567416 561 ntBASIC4.96□□□□□ -1.62
VPS8Q8N3P4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS8Q8N3P4 AC011816.2-201ENST00000607089 556 ntBASIC4.96□□□□□ -1.62
VPS8Q8N3P4 AL592295.2-201ENST00000612578 206 ntBASIC4.96□□□□□ -1.62
VPS8Q8N3P4 AL162574.2-201ENST00000614618 657 ntBASIC4.96□□□□□ -1.62
VPS8Q8N3P4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms