Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 ACTR3BP3-201ENST00000565577 979 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 MIR4646-201ENST00000580775 63 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC131235.4-201ENST00000609288 620 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC073114.1-201ENST00000612027 490 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC023158.2-201ENST00000614876 543 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AL607023.1-201ENST00000620045 248 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC092079.1-201ENST00000558620 1985 ntBASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.25□□□□□ -1.73
CLIP4Q8N3C7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 SGO1P1-201ENST00000603525 1447 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RN7SKP115-201ENST00000363177 317 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RNA5SP151-201ENST00000365632 117 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RNU6-317P-201ENST00000384031 107 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 Y_RNA.505-201ENST00000384489 102 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AL355379.1-201ENST00000405542 640 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RN7SKP267-201ENST00000410381 285 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RN7SKP100-201ENST00000411258 284 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 P2RY10P2-201ENST00000416730 913 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC073136.2-201ENST00000417282 849 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RPL7P44-201ENST00000424827 742 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 NANOGP6-201ENST00000429190 847 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RPL21P91-201ENST00000429231 479 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC129850.1-201ENST00000436203 508 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC093155.1-201ENST00000440164 826 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 FHP1-201ENST00000442741 703 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC011753.3-201ENST00000443436 406 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 MTCO2P25-201ENST00000447065 681 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 ISCUP1-201ENST00000454451 448 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RPL23AP2-201ENST00000471227 466 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RPL30P6-201ENST00000475925 342 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC109445.1-201ENST00000512356 383 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC005832.3-201ENST00000537929 631 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC007115.1-201ENST00000546853 234 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 MIR3667-201ENST00000581025 74 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC073091.2-201ENST00000603205 907 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AP001981.2-201ENST00000603241 418 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC064872.1-201ENST00000604823 1072 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC004223.4-201ENST00000612426 332 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 MIR7155-201ENST00000615925 56 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 MIR6853-201ENST00000619642 74 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 MIR6719-201ENST00000622428 87 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AP003072.4-201ENST00000624580 310 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC116618.1-201ENST00000634617 774 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 CR381670.1-201ENST00000624291 1693 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC009313.2-201ENST00000417893 1941 ntBASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLIP4Q8N3C7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.23□□□□□ -1.73
CLIP4Q8N3C7 HMGB1P5-201ENST00000255320 642 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms