Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC107982.3-201ENST00000584957 985 ntBASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 KLKP1-201ENST00000595979 403 ntBASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 AC099669.2-201ENST00000616549 437 ntBASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 AC244205.2-202ENST00000635781 342 ntBASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 AP000553.6-201ENST00000641242 118 ntBASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 AL021368.2-201ENST00000606125 5352 ntBASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 GABPAP-201ENST00000419271 1356 ntBASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 AC006042.3-201ENST00000454684 1469 ntBASIC4.1□□□□□ -1.75
CCDC65Q8IXS2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 PRO1804-201ENST00000623780 2050 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AF127577.6-201ENST00000623352 2191 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 RNU2-37P-201ENST00000410695 177 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AL049610.1-201ENST00000423374 372 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 MOB1AP1-201ENST00000430903 535 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 NDUFB1P1-201ENST00000435191 180 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 PDCL2P2-201ENST00000533651 189 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AC008083.2-201ENST00000546707 476 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AC099489.2-201ENST00000574976 260 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AL451086.1-201ENST00000605596 223 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 RNU1-30P-201ENST00000606575 163 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AC012557.1-201ENST00000607115 611 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AC015802.5-201ENST00000607478 399 ntBASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC65Q8IXS2 AL353746.1-201ENST00000566293 6881 ntBASIC4.09□□□□□ -1.76
CCDC65Q8IXS2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC65Q8IXS2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC65Q8IXS2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC65Q8IXS2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 RN7SKP280-201ENST00000364196 304 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 SNORA27.3-201ENST00000364937 134 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC007390.1-201ENST00000415722 356 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AL590623.1-201ENST00000427864 105 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 TRIM60P13-201ENST00000432350 1283 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC010655.1-201ENST00000449336 292 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 SUMO1P1-201ENST00000497904 306 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 HMGB1P47-201ENST00000511281 589 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC108120.2-201ENST00000512973 294 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC008489.1-201ENST00000524271 483 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC084824.1-201ENST00000550917 1005 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 ZNF192P1-203ENST00000565888 810 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 MTCO3P22-201ENST00000603219 784 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AL391834.1-201ENST00000609609 560 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 uc_338.9-201ENST00000617424 182 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 CR381670.1-201ENST00000624291 1693 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 OR6C71P-202ENST00000641886 1107 ntBASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC65Q8IXS2 AC119744.1-201ENST00000454746 1715 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AL359715.4-201ENST00000606629 1436 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 RNU6-666P-201ENST00000363499 107 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 RNU6-40P-201ENST00000384254 107 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 SNORA57.1-201ENST00000391227 145 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 TRGV6-201ENST00000417928 299 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 NIPA2P1-201ENST00000426223 976 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 MTCYBP12-201ENST00000440559 1134 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 HMGB1P5-202ENST00000451497 985 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms