Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 CBX3P1-201ENST00000325243 554 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 Y_RNA.9-201ENST00000362354 101 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 SNORA73.1-201ENST00000363107 205 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 RNU6-116P-201ENST00000384042 109 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 RNU6-297P-201ENST00000384636 107 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 MIR217-201ENST00000384817 110 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 MIR105-2-201ENST00000385083 81 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 RNA5SP105-201ENST00000391123 113 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC104333.2-201ENST00000422630 192 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 RPL7P11-201ENST00000437586 658 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 PSPHP1-201ENST00000450062 261 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 RPL7P24-201ENST00000493052 752 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC091951.2-201ENST00000500762 203 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC008628.2-201ENST00000502605 298 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 RNU6-875P-201ENST00000516488 106 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 IGJP1-201ENST00000522682 475 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC025260.1-201ENST00000548858 430 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC104687.2-201ENST00000604442 342 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 EIF3FP1-201ENST00000613970 806 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 MIR7155-201ENST00000615925 56 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC090510.2-201ENST00000617465 629 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC124864.2-201ENST00000624736 186 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 MTND4P12-201ENST00000498999 1377 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 ZNF680P1-201ENST00000436625 1469 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC092326.2-201ENST00000624772 1561 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VRK3Q8IV63 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VRK3Q8IV63 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC093591.2-201ENST00000565254 3843 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VRK3Q8IV63 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VRK3Q8IV63 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VRK3Q8IV63 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VRK3Q8IV63 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VRK3Q8IV63 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VRK3Q8IV63 RNU6-1339P-201ENST00000363574 91 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 RNU6-1263P-201ENST00000384601 106 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 MIR16-1-201ENST00000385271 89 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL645927.1-201ENST00000396783 406 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL357515.1-201ENST00000402967 542 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 RPL17P12-201ENST00000413391 526 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL590806.1-201ENST00000415818 853 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 NUP35P2-201ENST00000416748 943 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL139413.1-201ENST00000421309 217 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 Z93242.1-201ENST00000427102 353 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 RPL35AP21-201ENST00000437667 333 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 USP9YP8-201ENST00000441913 500 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 COX6CP18-201ENST00000448769 222 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC093270.2-201ENST00000486157 792 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC069439.1-201ENST00000494739 167 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC140172.1-201ENST00000502928 141 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 OR8A2P-201ENST00000528631 952 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AP002453.2-201ENST00000533503 320 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 OR8L1P-201ENST00000534005 955 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 AC005868.1-201ENST00000536421 331 ntBASIC4.84□□□□□ -1.63
VRK3Q8IV63 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.84□□□□□ -1.63
VRK3Q8IV63 LSM3P2-201ENST00000551246 273 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 1030.4 ms