Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SOD1P3-201ENST00000518682 454 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 AP000790.1-201ENST00000528891 737 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 OR10G5P-201ENST00000532733 358 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 MIR3691-201ENST00000578066 90 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 AC008966.2-201ENST00000606157 453 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 AC245297.2-201ENST00000610119 565 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 RMST_9.1-201ENST00000619945 193 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 AP002799.1-201ENST00000623552 423 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHFQ7M4L6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 AL118496.1-201ENST00000440201 1812 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHFQ7M4L6 AC107081.3-201ENST00000612715 2034 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SHFQ7M4L6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.16□□□□□ -1.74
SHFQ7M4L6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHFQ7M4L6 AL445523.1-201ENST00000451184 1362 ntBASIC4.15□□□□□ -1.74
SHFQ7M4L6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.15□□□□□ -1.74
SHFQ7M4L6 AC012020.1-201ENST00000624541 1728 ntBASIC4.15□□□□□ -1.74
SHFQ7M4L6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHFQ7M4L6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHFQ7M4L6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.15□□□□□ -1.74
SHFQ7M4L6 AC025125.1-201ENST00000624743 1922 ntBASIC4.15□□□□□ -1.74
SHFQ7M4L6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
SHFQ7M4L6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.15□□□□□ -1.74
SHFQ7M4L6 AC015813.6-201ENST00000624409 5808 ntBASIC4.15□□□□□ -1.74
SHFQ7M4L6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SHFQ7M4L6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHFQ7M4L6 ELL2P3-201ENST00000457883 1602 ntBASIC4.15□□□□□ -1.74
SHFQ7M4L6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 Y_RNA.25-201ENST00000362528 102 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 RN7SKP95-201ENST00000362860 303 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 SNORA4.1-201ENST00000364263 144 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 SNORD116-9-201ENST00000384000 95 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 SNORD116-3-201ENST00000384287 95 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 RNU6-171P-201ENST00000384354 107 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 RNU1-106P-201ENST00000384382 164 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 SNORD116-7-201ENST00000384404 95 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 SNORD116-5-201ENST00000384462 95 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 MIR765-201ENST00000390226 114 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 MIR708-201ENST00000390708 88 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AL021407.1-201ENST00000404531 386 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 HNRNPDP2-201ENST00000406475 478 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 RPL31P52-201ENST00000407532 367 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AL450338.1-201ENST00000407987 512 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 PIGPP2-201ENST00000411569 458 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AL591848.1-201ENST00000413092 322 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC016907.1-201ENST00000419483 435 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AL355433.1-201ENST00000422804 300 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 BX119904.4-201ENST00000424402 301 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 IPMKP1-201ENST00000425988 855 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 RPL21P91-201ENST00000429231 479 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 ELOCP8-201ENST00000439309 332 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 ELOCP15-201ENST00000442090 332 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 H2AFZP5-201ENST00000446960 382 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC239809.1-201ENST00000450470 217 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 RPS6P4-201ENST00000494693 758 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC112198.1-201ENST00000505369 1220 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC006499.3-201ENST00000506077 748 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 RNA5SP154-201ENST00000516193 111 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 RNA5SP92-201ENST00000516437 110 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 SCARNA21.2-201ENST00000516600 166 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 OR5AK1P-201ENST00000524837 922 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 SLC2A13P1-201ENST00000531560 322 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHFQ7M4L6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC090515.3-201ENST00000560431 315 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC091178.1-203ENST00000584586 279 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 NF1P5-201ENST00000588287 448 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC011487.3-201ENST00000593607 453 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC105129.3-201ENST00000605455 485 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 OR2AS2P-201ENST00000606902 342 ntBASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.15□□□□□ -1.75
SHFQ7M4L6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms