Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MIR423-201ENST00000362201 94 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RNU6-1320P-201ENST00000390838 107 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RNU6-1269P-201ENST00000391139 107 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 Z75741.1-201ENST00000446793 314 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RNU6-599P-201ENST00000459383 107 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RNU6-1193P-201ENST00000459461 107 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 EIF2S2P4-201ENST00000461070 984 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AC073522.1-201ENST00000483312 377 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AC119751.5-201ENST00000514077 770 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 SNORA70.19-201ENST00000516717 90 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 IGKV2-26-201ENST00000518305 343 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AC090819.1-201ENST00000523800 1111 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RNU6-368P-201ENST00000620928 107 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 MIR8057-201ENST00000620957 69 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RNU6-538P-201ENST00000622329 107 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 NR1H5P-201ENST00000452683 1377 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AC017071.1-201ENST00000564407 2204 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 OTUD4P1-201ENST00000237841 3067 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 Z98941.1-201ENST00000407764 100 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RNU6-55P-201ENST00000411092 107 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RNU6-954P-201ENST00000411355 107 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 Z99755.1-201ENST00000414048 380 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 MTCO1P51-201ENST00000427672 1060 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RPS6P12-201ENST00000432491 726 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 RPL23AP67-201ENST00000465341 474 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 TRBV8-2-201ENST00000475637 270 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AC098799.1-201ENST00000504752 800 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 VTA1P2-201ENST00000520205 911 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AP001636.2-201ENST00000525517 696 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 MIR4425-201ENST00000580572 84 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 AC025946.2-201ENST00000603398 234 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 Z82195.1-201ENST00000604558 398 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 OR6R2P-201ENST00000609216 300 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.14□□□□□ -1.75
RFX7Q2KHR2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.14□□□□□ -1.75
RFX7Q2KHR2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 ZNF833P-201ENST00000424938 1494 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 RNA5SP197-201ENST00000363357 119 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AP002088.1-201ENST00000382740 395 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 SNORA48.2-201ENST00000390926 124 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AL138878.1-201ENST00000405131 347 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 BX323014.1-201ENST00000412876 237 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AC127526.1-201ENST00000417526 366 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AP000936.3-201ENST00000438127 255 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AC099063.2-201ENST00000446360 662 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 RPL21P10-201ENST00000463521 490 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 RPL6P9-201ENST00000466502 859 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 RN7SL807P-201ENST00000470923 297 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 RPS29P2-201ENST00000479278 136 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 RPL7P47-201ENST00000497299 556 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AC020893.1-201ENST00000502452 580 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 PHBP14-201ENST00000512887 367 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 RN7SKP60-201ENST00000516985 239 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AC107934.2-201ENST00000518653 310 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 TGIF1P1-201ENST00000558095 802 ntBASIC4.13□□□□□ -1.75
RFX7Q2KHR2 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RFX7Q2KHR2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
RFX7Q2KHR2 AC134882.1-201ENST00000603738 1676 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 AL645937.1-201ENST00000641739 1652 ntBASIC4.12□□□□□ -1.75
RFX7Q2KHR2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms