Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.89□□□□□ -1.95
LSM3P62310 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.89□□□□□ -1.95
LSM3P62310 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.89□□□□□ -1.95
LSM3P62310 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LSM3P62310 SEPT7P7-201ENST00000420492 1301 ntBASIC2.89□□□□□ -1.95
LSM3P62310 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LSM3P62310 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LSM3P62310 DDX6P1-205ENST00000441966 1436 ntBASIC2.88□□□□□ -1.95
LSM3P62310 GTF2H2B-203ENST00000508065 1432 ntBASIC2.88□□□□□ -1.95
LSM3P62310 RNU6-304P-201ENST00000364855 107 ntBASIC2.88□□□□□ -1.95
LSM3P62310 MIR192-201ENST00000384915 110 ntBASIC2.88□□□□□ -1.95
LSM3P62310 AC048351.1-201ENST00000420064 602 ntBASIC2.88□□□□□ -1.95
LSM3P62310 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM3P62310 RNU6-1218P-201ENST00000458990 108 ntBASIC2.88□□□□□ -1.95
LSM3P62310 AC005912.1-201ENST00000495392 255 ntBASIC2.88□□□□□ -1.95
LSM3P62310 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM3P62310 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.88□□□□□ -1.95
LSM3P62310 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.88□□□□□ -1.95
LSM3P62310 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.88□□□□□ -1.95
LSM3P62310 OR4A2P-201ENST00000527276 913 ntBASIC2.88□□□□□ -1.95
LSM3P62310 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.88□□□□□ -1.95
LSM3P62310 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.88□□□□□ -1.95
LSM3P62310 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.88□□□□□ -1.95
LSM3P62310 AC025884.1-201ENST00000556034 378 ntBASIC2.88□□□□□ -1.95
LSM3P62310 OR4H12P-201ENST00000556269 907 ntBASIC2.88□□□□□ -1.95
LSM3P62310 KPNA2P3-201ENST00000584190 848 ntBASIC2.88□□□□□ -1.95
LSM3P62310 AC006116.10-201ENST00000591836 581 ntBASIC2.88□□□□□ -1.95
LSM3P62310 AC006557.5-201ENST00000603126 811 ntBASIC2.88□□□□□ -1.95
LSM3P62310 MIR6862-1-201ENST00000613016 70 ntBASIC2.88□□□□□ -1.95
LSM3P62310 MIR6862-2-201ENST00000614755 70 ntBASIC2.88□□□□□ -1.95
LSM3P62310 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.88□□□□□ -1.95
LSM3P62310 AL356321.1-201ENST00000621360 228 ntBASIC2.88□□□□□ -1.95
LSM3P62310 AL354798.1-201ENST00000622505 329 ntBASIC2.88□□□□□ -1.95
LSM3P62310 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM3P62310 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.88□□□□□ -1.95
LSM3P62310 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
LSM3P62310 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LSM3P62310 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.87□□□□□ -1.95
LSM3P62310 AL121657.1-201ENST00000327215 531 ntBASIC2.87□□□□□ -1.95
LSM3P62310 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LSM3P62310 SNORD3H-201ENST00000384486 214 ntBASIC2.87□□□□□ -1.95
LSM3P62310 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
LSM3P62310 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM3P62310 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.87□□□□□ -1.95
LSM3P62310 RBMY2KP-201ENST00000418221 992 ntBASIC2.87□□□□□ -1.95
LSM3P62310 AC092832.1-201ENST00000422934 400 ntBASIC2.87□□□□□ -1.95
LSM3P62310 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM3P62310 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM3P62310 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.87□□□□□ -1.95
LSM3P62310 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.87□□□□□ -1.95
LSM3P62310 CFTRP1-201ENST00000456646 183 ntBASIC2.87□□□□□ -1.95
LSM3P62310 RPS7P7-201ENST00000463499 571 ntBASIC2.87□□□□□ -1.95
LSM3P62310 RPL32P9-201ENST00000487963 407 ntBASIC2.87□□□□□ -1.95
LSM3P62310 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM3P62310 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.87□□□□□ -1.95
LSM3P62310 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LSM3P62310 APOOP4-201ENST00000513530 597 ntBASIC2.87□□□□□ -1.95
LSM3P62310 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.87□□□□□ -1.95
LSM3P62310 AP000619.3-201ENST00000535634 1127 ntBASIC2.87□□□□□ -1.95
LSM3P62310 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.87□□□□□ -1.95
LSM3P62310 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.87□□□□□ -1.95
LSM3P62310 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.87□□□□□ -1.95
LSM3P62310 AC137768.1-201ENST00000549998 553 ntBASIC2.87□□□□□ -1.95
LSM3P62310 ABI1P1-201ENST00000603375 1120 ntBASIC2.87□□□□□ -1.95
LSM3P62310 AC099676.1-201ENST00000608886 657 ntBASIC2.87□□□□□ -1.95
LSM3P62310 Mico1.1-201ENST00000611698 204 ntBASIC2.87□□□□□ -1.95
LSM3P62310 AC127502.3-201ENST00000636170 1206 ntBASIC2.87□□□□□ -1.95
LSM3P62310 AC006042.3-201ENST00000454684 1469 ntBASIC2.87□□□□□ -1.95
LSM3P62310 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LSM3P62310 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LSM3P62310 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LSM3P62310 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LSM3P62310 AL136964.1-201ENST00000622038 2990 ntBASIC2.87□□□□□ -1.95
LSM3P62310 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LSM3P62310 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LSM3P62310 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LSM3P62310 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LSM3P62310 RNA5SP51-201ENST00000364750 119 ntBASIC2.86□□□□□ -1.95
LSM3P62310 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LSM3P62310 RPL32P23-201ENST00000397237 405 ntBASIC2.86□□□□□ -1.95
LSM3P62310 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.86□□□□□ -1.95
LSM3P62310 RNA5SP229-201ENST00000410809 99 ntBASIC2.86□□□□□ -1.95
LSM3P62310 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.86□□□□□ -1.95
LSM3P62310 YY1P1-201ENST00000427625 668 ntBASIC2.86□□□□□ -1.95
LSM3P62310 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LSM3P62310 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.86□□□□□ -1.95
LSM3P62310 CYCSP42-201ENST00000450823 238 ntBASIC2.86□□□□□ -1.95
LSM3P62310 AC069277.2-201ENST00000454211 432 ntBASIC2.86□□□□□ -1.95
LSM3P62310 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.86□□□□□ -1.95
LSM3P62310 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.86□□□□□ -1.95
LSM3P62310 RPL21P41-201ENST00000459863 264 ntBASIC2.86□□□□□ -1.95
LSM3P62310 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC2.86□□□□□ -1.95
LSM3P62310 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.86□□□□□ -1.95
LSM3P62310 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.86□□□□□ -1.95
LSM3P62310 AC026402.1-201ENST00000513642 170 ntBASIC2.86□□□□□ -1.95
LSM3P62310 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LSM3P62310 RN7SKP43-201ENST00000516173 320 ntBASIC2.86□□□□□ -1.95
LSM3P62310 AC009643.1-201ENST00000532030 391 ntBASIC2.86□□□□□ -1.95
LSM3P62310 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.86□□□□□ -1.95
LSM3P62310 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms