Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RIPK4P57078 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.54□□□□□ -1.68
RIPK4P57078 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK4P57078 AC090971.4-201ENST00000560291 1800 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.54□□□□□ -1.68
RIPK4P57078 SNORA63.1-201ENST00000362493 131 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 RNU4-23P-201ENST00000362839 140 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK4P57078 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.54□□□□□ -1.68
RIPK4P57078 AC097713.2-201ENST00000430199 356 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 AC245517.2-201ENST00000442890 346 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.54□□□□□ -1.68
RIPK4P57078 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK4P57078 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.54□□□□□ -1.68
RIPK4P57078 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.54□□□□□ -1.68
RIPK4P57078 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.54□□□□□ -1.68
RIPK4P57078 MIR4738-201ENST00000579134 87 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.54□□□□□ -1.68
RIPK4P57078 AL355365.1-201ENST00000616480 294 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 AC022149.2-201ENST00000621061 203 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.54□□□□□ -1.68
RIPK4P57078 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK4P57078 CEP170P1-201ENST00000502249 4587 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK4P57078 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RIPK4P57078 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 MFSD8-233ENST00000641482 4860 ntBASIC4.54□□□□□ -1.68
RIPK4P57078 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK4P57078 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RIPK4P57078 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RIPK4P57078 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK4P57078 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK4P57078 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RIPK4P57078 RNU6-891P-201ENST00000384280 111 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK4P57078 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
RIPK4P57078 HSFY4P-201ENST00000415994 1181 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 LINC01881-201ENST00000416103 412 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.53□□□□□ -1.68
RIPK4P57078 AP000907.1-201ENST00000428428 510 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.53□□□□□ -1.68
RIPK4P57078 EIF4A1P11-201ENST00000451239 222 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 RPL31P53-201ENST00000457065 348 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 RPS4XP10-201ENST00000465034 731 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.53□□□□□ -1.68
RIPK4P57078 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.53□□□□□ -1.68
RIPK4P57078 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.53□□□□□ -1.68
RIPK4P57078 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.53□□□□□ -1.68
RIPK4P57078 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RIPK4P57078 SNORD39.2-201ENST00000579995 76 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 BNIP3P38-201ENST00000601117 544 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 BNIP3P7-201ENST00000605641 516 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 AC006946.3-201ENST00000609791 756 ntBASIC4.53□□□□□ -1.68
RIPK4P57078 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.53□□□□□ -1.68
RIPK4P57078 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.53□□□□□ -1.68
RIPK4P57078 AC066616.2-201ENST00000559334 1481 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 AC234772.1-201ENST00000377927 937 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 BX323014.1-201ENST00000412876 237 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 RFESDP1-201ENST00000422350 461 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 Z85994.2-201ENST00000434327 452 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.52□□□□□ -1.69
RIPK4P57078 AL136097.1-201ENST00000456945 913 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.52□□□□□ -1.69
RIPK4P57078 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.52□□□□□ -1.69
RIPK4P57078 MTND3P6-201ENST00000485242 339 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 RPL7P47-201ENST00000497299 556 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
RIPK4P57078 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.52□□□□□ -1.69
RIPK4P57078 OR4C2P-201ENST00000530855 1064 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.52□□□□□ -1.69
RIPK4P57078 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.52□□□□□ -1.69
RIPK4P57078 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.52□□□□□ -1.69
RIPK4P57078 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.52□□□□□ -1.69
RIPK4P57078 AC074050.1-201ENST00000563247 211 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 CD24P2-201ENST00000565486 219 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 RMST_8.1-201ENST00000610287 165 ntBASIC4.52□□□□□ -1.69
RIPK4P57078 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK4P57078 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.52□□□□□ -1.69
RIPK4P57078 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK4P57078 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK4P57078 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RIPK4P57078 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RIPK4P57078 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RIPK4P57078 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RIPK4P57078 RNU6-1263P-201ENST00000384601 106 ntBASIC4.51□□□□□ -1.69
RIPK4P57078 RSL24D1P1-201ENST00000404972 493 ntBASIC4.51□□□□□ -1.69
RIPK4P57078 RNA5SP239-201ENST00000410218 129 ntBASIC4.51□□□□□ -1.69
RIPK4P57078 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RIPK4P57078 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.51□□□□□ -1.69
RIPK4P57078 PRSS3P4-201ENST00000453323 162 ntBASIC4.51□□□□□ -1.69
RIPK4P57078 RPL7P49-201ENST00000471402 708 ntBASIC4.51□□□□□ -1.69
RIPK4P57078 FCF1P3-201ENST00000496394 590 ntBASIC4.51□□□□□ -1.69
RIPK4P57078 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.51□□□□□ -1.69
RIPK4P57078 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.51□□□□□ -1.69
RIPK4P57078 RNU6-319P-201ENST00000516025 108 ntBASIC4.51□□□□□ -1.69
RIPK4P57078 SNORA70.14-201ENST00000516205 110 ntBASIC4.51□□□□□ -1.69
RIPK4P57078 RNU6-751P-201ENST00000516382 101 ntBASIC4.51□□□□□ -1.69
RIPK4P57078 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.51□□□□□ -1.69
RIPK4P57078 AC022784.5-201ENST00000522241 437 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms