Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HMGN2P21-201ENST00000447764 270 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC098824.1-201ENST00000453565 980 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 OR9M1P-201ENST00000459641 921 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 RPL37P6-202ENST00000464216 403 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 PTGES3P3-201ENST00000511479 482 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC005798.1-201ENST00000513715 387 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 RNA5SP164-201ENST00000516533 110 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC008562.1-201ENST00000521763 330 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CSNK1A1P48729 OR8R1P-201ENST00000543943 764 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC090877.1-201ENST00000561418 344 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AL731537.2-201ENST00000561565 951 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 MIR4286-201ENST00000580651 93 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AP000919.1-202ENST00000581139 1264 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 MIR4697-201ENST00000582977 78 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AL354760.1-201ENST00000608357 643 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AL118556.2-201ENST00000614375 824 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC107308.1-201ENST00000615897 301 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 MIR6875-201ENST00000617506 72 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CSNK1A1P48729 MIR6810-201ENST00000622701 70 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AL356490.1-201ENST00000623079 479 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 RNA5SP196-201ENST00000625967 102 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 MTND5P3-201ENST00000438536 1800 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 AL353746.1-201ENST00000566293 6881 ntBASIC3.41□□□□□ -1.86
CSNK1A1P48729 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CSNK1A1P48729 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CSNK1A1P48729 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
CSNK1A1P48729 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CSNK1A1P48729 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CSNK1A1P48729 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CSNK1A1P48729 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CSNK1A1P48729 METTL21EP-201ENST00000298105 713 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 SNORD115-48-201ENST00000364764 76 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 AL353692.2-201ENST00000407054 335 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 MTCO3P43-201ENST00000440974 771 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 AC092809.1-201ENST00000441469 474 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 ARL5AP2-201ENST00000444698 533 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AL500527.1-201ENST00000448532 255 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 DNAJC19P1-201ENST00000455312 319 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CSNK1A1P48729 RPL7P47-201ENST00000497299 556 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 AC004069.2-201ENST00000505438 1114 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AC092593.2-201ENST00000513866 913 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 AC022695.1-201ENST00000522089 237 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 CKS1BP1-201ENST00000555221 240 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AL354696.1-201ENST00000614652 497 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AL133383.2-201ENST00000622958 2336 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CSNK1A1P48729 AC011978.2-201ENST00000569835 2054 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CSNK1A1P48729 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CSNK1A1P48729 NCAPGP1-201ENST00000505112 1814 ntBASIC3.4□□□□□ -1.87
CSNK1A1P48729 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CSNK1A1P48729 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CSNK1A1P48729 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CSNK1A1P48729 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
CSNK1A1P48729 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CSNK1A1P48729 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.39□□□□□ -1.87
CSNK1A1P48729 RNA5SP391-201ENST00000363456 119 ntBASIC3.39□□□□□ -1.87
CSNK1A1P48729 RNU6-213P-201ENST00000384051 104 ntBASIC3.39□□□□□ -1.87
CSNK1A1P48729 RNU6-328P-201ENST00000390887 106 ntBASIC3.39□□□□□ -1.87
CSNK1A1P48729 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CSNK1A1P48729 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CSNK1A1P48729 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms