Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC010385.1-201ENST00000412374 256 ntBASIC3.54□□□□□ -1.84
RFC3P40938 RAB9AP3-201ENST00000412737 573 ntBASIC3.54□□□□□ -1.84
RFC3P40938 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC3P40938 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 AL451062.2-201ENST00000427515 271 ntBASIC3.54□□□□□ -1.84
RFC3P40938 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC3P40938 RAB9AP1-201ENST00000449393 573 ntBASIC3.54□□□□□ -1.84
RFC3P40938 U8.18-201ENST00000459285 133 ntBASIC3.54□□□□□ -1.84
RFC3P40938 RPL21P11-201ENST00000461458 483 ntBASIC3.54□□□□□ -1.84
RFC3P40938 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 RPL7P47-201ENST00000497299 556 ntBASIC3.54□□□□□ -1.84
RFC3P40938 AC021146.1-201ENST00000511202 716 ntBASIC3.54□□□□□ -1.84
RFC3P40938 RNA5SP309-201ENST00000516670 106 ntBASIC3.54□□□□□ -1.84
RFC3P40938 IGKV2-38-201ENST00000517443 247 ntBASIC3.54□□□□□ -1.84
RFC3P40938 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC3P40938 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC3P40938 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 OR4A12P-201ENST00000530847 918 ntBASIC3.54□□□□□ -1.84
RFC3P40938 OR4C2P-201ENST00000530855 1064 ntBASIC3.54□□□□□ -1.84
RFC3P40938 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.54□□□□□ -1.84
RFC3P40938 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC3P40938 AC012414.2-201ENST00000559474 187 ntBASIC3.54□□□□□ -1.84
RFC3P40938 AC022968.1-201ENST00000567372 442 ntBASIC3.54□□□□□ -1.84
RFC3P40938 AC053481.3-201ENST00000577881 843 ntBASIC3.54□□□□□ -1.84
RFC3P40938 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC3P40938 PCNAP1-202ENST00000595299 752 ntBASIC3.54□□□□□ -1.84
RFC3P40938 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.54□□□□□ -1.84
RFC3P40938 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.54□□□□□ -1.84
RFC3P40938 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 AC005344.1-201ENST00000613391 459 ntBASIC3.54□□□□□ -1.84
RFC3P40938 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 U6.48-201ENST00000618523 106 ntBASIC3.54□□□□□ -1.84
RFC3P40938 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFC3P40938 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFC3P40938 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.53□□□□□ -1.84
RFC3P40938 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFC3P40938 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.53□□□□□ -1.84
RFC3P40938 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFC3P40938 MFSD8-236ENST00000641509 4050 ntBASIC3.53□□□□□ -1.84
RFC3P40938 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.53□□□□□ -1.84
RFC3P40938 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
RFC3P40938 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFC3P40938 SNORA71.3-201ENST00000362582 128 ntBASIC3.53□□□□□ -1.84
RFC3P40938 SNORA73.2-201ENST00000364946 201 ntBASIC3.53□□□□□ -1.84
RFC3P40938 U3.15-201ENST00000365398 212 ntBASIC3.53□□□□□ -1.84
RFC3P40938 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC3P40938 RPL30P2-201ENST00000414021 291 ntBASIC3.53□□□□□ -1.84
RFC3P40938 AC114814.2-201ENST00000419195 485 ntBASIC3.53□□□□□ -1.84
RFC3P40938 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC3P40938 MTCO1P54-201ENST00000430139 712 ntBASIC3.53□□□□□ -1.84
RFC3P40938 USP9YP7-201ENST00000436723 430 ntBASIC3.53□□□□□ -1.84
RFC3P40938 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC3P40938 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFC3P40938 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.53□□□□□ -1.84
RFC3P40938 USP9YP32-201ENST00000452432 430 ntBASIC3.53□□□□□ -1.84
RFC3P40938 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.53□□□□□ -1.84
RFC3P40938 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.53□□□□□ -1.84
RFC3P40938 AC010342.1-201ENST00000514047 877 ntBASIC3.53□□□□□ -1.84
RFC3P40938 SCARNA14-201ENST00000516903 136 ntBASIC3.53□□□□□ -1.84
RFC3P40938 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC3P40938 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC3P40938 AC087369.1-201ENST00000520775 996 ntBASIC3.53□□□□□ -1.84
RFC3P40938 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC3P40938 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC3P40938 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.53□□□□□ -1.84
RFC3P40938 AC069304.3-201ENST00000603938 1084 ntBASIC3.53□□□□□ -1.84
RFC3P40938 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.53□□□□□ -1.84
RFC3P40938 AP000255.1-201ENST00000610276 676 ntBASIC3.53□□□□□ -1.84
RFC3P40938 AC016911.1-201ENST00000613297 452 ntBASIC3.53□□□□□ -1.84
RFC3P40938 AC243756.2-201ENST00000618406 463 ntBASIC3.53□□□□□ -1.84
RFC3P40938 AC020978.9-201ENST00000624380 1141 ntBASIC3.53□□□□□ -1.84
RFC3P40938 AC024023.1-201ENST00000624530 922 ntBASIC3.53□□□□□ -1.84
RFC3P40938 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.53□□□□□ -1.84
RFC3P40938 AF001550.2-201ENST00000636643 217 ntBASIC3.53□□□□□ -1.84
RFC3P40938 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFC3P40938 NCAPGP1-201ENST00000505112 1814 ntBASIC3.53□□□□□ -1.84
RFC3P40938 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
RFC3P40938 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
RFC3P40938 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
RFC3P40938 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
RFC3P40938 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.52□□□□□ -1.85
RFC3P40938 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.52□□□□□ -1.85
RFC3P40938 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFC3P40938 AC025125.1-201ENST00000624743 1922 ntBASIC3.52□□□□□ -1.85
RFC3P40938 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.52□□□□□ -1.85
RFC3P40938 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFC3P40938 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.52□□□□□ -1.85
RFC3P40938 AL589655.1-201ENST00000405398 482 ntBASIC3.52□□□□□ -1.85
RFC3P40938 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFC3P40938 SNORA3.3-201ENST00000408712 125 ntBASIC3.52□□□□□ -1.85
RFC3P40938 AL139247.1-201ENST00000422768 325 ntBASIC3.52□□□□□ -1.85
RFC3P40938 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.52□□□□□ -1.85
RFC3P40938 AC023347.2-201ENST00000433994 462 ntBASIC3.52□□□□□ -1.85
RFC3P40938 Z74696.2-201ENST00000436514 498 ntBASIC3.52□□□□□ -1.85
RFC3P40938 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.52□□□□□ -1.85
RFC3P40938 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.52□□□□□ -1.85
RFC3P40938 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.52□□□□□ -1.85
RFC3P40938 AL358232.1-201ENST00000448030 501 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms