Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU1-30P-201ENST00000606575 163 ntBASIC3.56□□□□□ -1.84
RPA3P35244 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPA3P35244 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RPA3P35244 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPA3P35244 AP001486.2-201ENST00000561652 5113 ntBASIC3.56□□□□□ -1.84
RPA3P35244 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
RPA3P35244 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.56□□□□□ -1.84
RPA3P35244 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RPA3P35244 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPA3P35244 OR11H5P-202ENST00000641612 1325 ntBASIC3.55□□□□□ -1.84
RPA3P35244 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPA3P35244 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RPA3P35244 RNU1-75P-201ENST00000347264 129 ntBASIC3.55□□□□□ -1.84
RPA3P35244 RNU6-618P-201ENST00000363518 112 ntBASIC3.55□□□□□ -1.84
RPA3P35244 RN7SKP44-201ENST00000363602 316 ntBASIC3.55□□□□□ -1.84
RPA3P35244 RPL7P60-201ENST00000397636 735 ntBASIC3.55□□□□□ -1.84
RPA3P35244 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.55□□□□□ -1.84
RPA3P35244 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RPA3P35244 RNA5SP31-201ENST00000411144 127 ntBASIC3.55□□□□□ -1.84
RPA3P35244 AC009237.5-201ENST00000414271 501 ntBASIC3.55□□□□□ -1.84
RPA3P35244 MTND4P11-201ENST00000417020 1058 ntBASIC3.55□□□□□ -1.84
RPA3P35244 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.55□□□□□ -1.84
RPA3P35244 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.55□□□□□ -1.84
RPA3P35244 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.55□□□□□ -1.84
RPA3P35244 RRM2P4-201ENST00000441721 562 ntBASIC3.55□□□□□ -1.84
RPA3P35244 AC245517.2-201ENST00000442890 346 ntBASIC3.55□□□□□ -1.84
RPA3P35244 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPA3P35244 AL357552.1-201ENST00000445254 415 ntBASIC3.55□□□□□ -1.84
RPA3P35244 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.55□□□□□ -1.84
RPA3P35244 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.55□□□□□ -1.84
RPA3P35244 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.55□□□□□ -1.84
RPA3P35244 ACTR3P3-201ENST00000480448 893 ntBASIC3.55□□□□□ -1.84
RPA3P35244 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.55□□□□□ -1.84
RPA3P35244 AC021146.7-201ENST00000509604 775 ntBASIC3.55□□□□□ -1.84
RPA3P35244 AC023632.4-201ENST00000517783 191 ntBASIC3.55□□□□□ -1.84
RPA3P35244 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.55□□□□□ -1.84
RPA3P35244 MTCO1P49-201ENST00000523429 802 ntBASIC3.55□□□□□ -1.84
RPA3P35244 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.55□□□□□ -1.84
RPA3P35244 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.55□□□□□ -1.84
RPA3P35244 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.55□□□□□ -1.84
RPA3P35244 AC106785.3-201ENST00000564064 847 ntBASIC3.55□□□□□ -1.84
RPA3P35244 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.55□□□□□ -1.84
RPA3P35244 AC005972.3-201ENST00000606304 481 ntBASIC3.55□□□□□ -1.84
RPA3P35244 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.55□□□□□ -1.84
RPA3P35244 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPA3P35244 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
RPA3P35244 ASNSP1-204ENST00000641977 1664 ntBASIC3.55□□□□□ -1.84
RPA3P35244 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.55□□□□□ -1.84
RPA3P35244 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPA3P35244 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RPA3P35244 AC100871.1-201ENST00000507871 1456 ntBASIC3.54□□□□□ -1.84
RPA3P35244 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPA3P35244 AC096656.1-201ENST00000623826 1364 ntBASIC3.54□□□□□ -1.84
RPA3P35244 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPA3P35244 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPA3P35244 SNORD3H-201ENST00000384486 214 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AC007066.1-201ENST00000392902 381 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.54□□□□□ -1.84
RPA3P35244 AL035423.1-201ENST00000420331 213 ntBASIC3.54□□□□□ -1.84
RPA3P35244 RPS15AP6-201ENST00000420703 385 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AC245054.1-201ENST00000420944 258 ntBASIC3.54□□□□□ -1.84
RPA3P35244 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.54□□□□□ -1.84
RPA3P35244 GLRXP1-201ENST00000423261 334 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.54□□□□□ -1.84
RPA3P35244 NDUFA5P10-201ENST00000432147 357 ntBASIC3.54□□□□□ -1.84
RPA3P35244 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RPA3P35244 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.54□□□□□ -1.84
RPA3P35244 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.54□□□□□ -1.84
RPA3P35244 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.54□□□□□ -1.84
RPA3P35244 HMGB3P8-201ENST00000449709 577 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AC007967.1-201ENST00000455422 1159 ntBASIC3.54□□□□□ -1.84
RPA3P35244 RPL7L1P8-201ENST00000469911 741 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AC021205.2-201ENST00000480069 347 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.54□□□□□ -1.84
RPA3P35244 SNORA26.10-201ENST00000516427 141 ntBASIC3.54□□□□□ -1.84
RPA3P35244 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RPA3P35244 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.54□□□□□ -1.84
RPA3P35244 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.54□□□□□ -1.84
RPA3P35244 AL049874.4-201ENST00000557593 255 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AC092868.3-201ENST00000560515 784 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.54□□□□□ -1.84
RPA3P35244 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.54□□□□□ -1.84
RPA3P35244 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.54□□□□□ -1.84
RPA3P35244 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPA3P35244 AC022146.1-201ENST00000595307 847 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AL109618.2-201ENST00000605527 211 ntBASIC3.54□□□□□ -1.84
RPA3P35244 AL161637.1-201ENST00000622380 412 ntBASIC3.54□□□□□ -1.84
RPA3P35244 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.54□□□□□ -1.84
RPA3P35244 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.54□□□□□ -1.84
RPA3P35244 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPA3P35244 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPA3P35244 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPA3P35244 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
RPA3P35244 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.53□□□□□ -1.84
RPA3P35244 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.53□□□□□ -1.84
RPA3P35244 AL359715.4-201ENST00000606629 1436 ntBASIC3.53□□□□□ -1.84
RPA3P35244 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.53□□□□□ -1.84
RPA3P35244 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RPA3P35244 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.53□□□□□ -1.84
RPA3P35244 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms