Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC069218.2-201ENST00000411665 344 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 BTF3P9-201ENST00000418784 283 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC114814.2-201ENST00000419195 485 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 MTCO1P45-201ENST00000431457 267 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 OR6C71P-201ENST00000432580 913 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 MTCYBP31-201ENST00000438855 1122 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AL645931.1-201ENST00000439737 410 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 CYCSP53-201ENST00000455540 265 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 SNORD108-201ENST00000459332 71 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 SLC25A15P5-201ENST00000508033 253 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 ACTR6P1-201ENST00000514311 1104 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 RN7SKP141-201ENST00000516167 338 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 Vault.1-201ENST00000516474 102 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 SCARNA14-201ENST00000516903 136 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 HIGD1AP10-201ENST00000527837 282 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 OR4U1P-201ENST00000554958 912 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC106785.3-201ENST00000564064 847 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 KLKP1-201ENST00000595979 403 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 AL133247.2-201ENST00000603236 482 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC245389.1-201ENST00000605141 529 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AL355816.1-201ENST00000607951 118 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC005021.1-201ENST00000608730 355 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 MFSD8-236ENST00000641509 4050 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 RIOK3P1-201ENST00000418778 1528 ntBASIC2.81□□□□□ -1.96
HLA-DMBP28068 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DMBP28068 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DMBP28068 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DMBP28068 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 OR4A15-201ENST00000314706 1035 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DMBP28068 RNU6-283P-201ENST00000364788 107 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 MIR30B-201ENST00000384850 88 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 PTMAP2-201ENST00000397627 327 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 CCNB2P1-201ENST00000399411 1150 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 SNORA57.3-201ENST00000411095 141 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 RNA5SP498-201ENST00000411342 120 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AIMP1P1-201ENST00000418670 937 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 TCEA1P2-201ENST00000420496 906 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 ARL4AP4-201ENST00000434170 518 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 RRM2P4-201ENST00000441721 562 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 TMED11P-201ENST00000479478 690 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 RPS3AP50-201ENST00000487064 803 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 UBE2CP3-201ENST00000502715 450 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC008489.1-201ENST00000524271 483 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC006960.3-201ENST00000561845 705 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC074050.1-201ENST00000563247 211 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 NF1P5-201ENST00000588287 448 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AL450489.1-201ENST00000612071 468 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC008121.2-201ENST00000614647 523 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC245389.2-201ENST00000616023 576 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AL589935.2-201ENST00000616471 1231 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC006133.1-201ENST00000617106 264 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC242843.1-201ENST00000618702 573 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DMBP28068 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DMBP28068 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DMBP28068 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DMBP28068 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms