Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 VDAC1P6-201ENST00000430062 855 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC007537.2-201ENST00000472093 511 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 NDUFB4P2-201ENST00000509515 391 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 MTND5P4-201ENST00000514978 288 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AP003080.1-202ENST00000526526 915 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 OR6C73P-201ENST00000546432 358 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 NANOGP3-201ENST00000605855 286 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 MIR1321-201ENST00000637766 79 ntBASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.26□□□□□ -1.25
CSB-PGBD3P0DP91 AC068870.1-201ENST00000563737 2455 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RNA5SP326-201ENST00000363209 110 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 SNORD1C-201ENST00000363315 78 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 Y_RNA.138-201ENST00000363462 102 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RNU5E-5P-201ENST00000365379 116 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RNA5SP487-201ENST00000410186 122 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RPL26P29-201ENST00000415623 438 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RPS3AP38-201ENST00000435889 763 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 SNRPFP4-201ENST00000456366 242 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RNU6-1218P-201ENST00000458990 108 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RPL38P1-201ENST00000460914 211 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RPS3AP41-201ENST00000462701 778 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC097493.1-201ENST00000463958 372 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC091564.1-201ENST00000464563 479 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 RPS4XP20-201ENST00000505751 772 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC026427.2-201ENST00000506228 536 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC004980.4-201ENST00000513375 203 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AL121821.2-201ENST00000556081 394 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC018558.5-201ENST00000565840 952 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC141257.3-201ENST00000572906 215 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC106900.2-201ENST00000604994 317 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AL133481.2-203ENST00000607558 139 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC008121.3-201ENST00000618726 433 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 CRYM-AS1-204ENST00000637983 556 ntBASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CSB-PGBD3P0DP91 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AC011933.2-201ENST00000578539 2790 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 Y_RNA.58-201ENST00000362807 102 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 Y_RNA.132-201ENST00000363421 102 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 Y_RNA.154-201ENST00000363624 102 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 RNY3P1-201ENST00000365085 102 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 RNY3-201ENST00000365484 102 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 RNU6-444P-201ENST00000383988 108 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 Y_RNA.409-201ENST00000383990 98 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 SNORA51.8-201ENST00000384234 132 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 Y_RNA.490-201ENST00000384413 102 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 AMD1P2-201ENST00000412936 992 ntBASIC7.24□□□□□ -1.25
CSB-PGBD3P0DP91 RPSAP35-201ENST00000413753 818 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms