Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.67□□□□□ -1.66
MMP3P08254 AP003392.5-201ENST00000607857 415 ntBASIC4.67□□□□□ -1.66
MMP3P08254 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 U6.48-201ENST00000618523 106 ntBASIC4.67□□□□□ -1.66
MMP3P08254 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
MMP3P08254 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 AC000367.1-201ENST00000452711 1766 ntBASIC4.67□□□□□ -1.66
MMP3P08254 AC005332.5-201ENST00000591222 2919 ntBASIC4.67□□□□□ -1.66
MMP3P08254 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.67□□□□□ -1.66
MMP3P08254 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 USP9YP4-201ENST00000424401 1745 ntBASIC4.66□□□□□ -1.66
MMP3P08254 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MMP3P08254 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
MMP3P08254 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MMP3P08254 NOL8P1-201ENST00000508336 3529 ntBASIC4.66□□□□□ -1.66
MMP3P08254 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
MMP3P08254 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MMP3P08254 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MMP3P08254 RNU4-40P-201ENST00000364351 143 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AL079342.2-201ENST00000403367 482 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AL590084.1-201ENST00000407885 387 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC107081.1-201ENST00000414975 361 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.66□□□□□ -1.66
MMP3P08254 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.66□□□□□ -1.66
MMP3P08254 AC006946.1-201ENST00000429106 328 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.66□□□□□ -1.66
MMP3P08254 RPS27AP15-201ENST00000447672 466 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.66□□□□□ -1.66
MMP3P08254 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.66□□□□□ -1.66
MMP3P08254 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.66□□□□□ -1.66
MMP3P08254 RPL21P6-201ENST00000479171 504 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC073522.1-201ENST00000483312 377 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC146944.2-203ENST00000502493 354 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.66□□□□□ -1.66
MMP3P08254 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.66□□□□□ -1.66
MMP3P08254 AC139495.1-202ENST00000513164 354 ntBASIC4.66□□□□□ -1.66
MMP3P08254 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.66□□□□□ -1.66
MMP3P08254 AC138938.1-201ENST00000515431 782 ntBASIC4.66□□□□□ -1.66
MMP3P08254 RNU6-416P-201ENST00000516265 103 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC090151.1-201ENST00000520784 730 ntBASIC4.66□□□□□ -1.66
MMP3P08254 IGJP1-201ENST00000522682 475 ntBASIC4.66□□□□□ -1.66
MMP3P08254 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 CYCSP28-201ENST00000534284 321 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC092747.2-201ENST00000545069 983 ntBASIC4.66□□□□□ -1.66
MMP3P08254 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
MMP3P08254 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.66□□□□□ -1.66
MMP3P08254 AC233702.9-201ENST00000581528 203 ntBASIC4.66□□□□□ -1.66
MMP3P08254 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.66□□□□□ -1.66
MMP3P08254 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 TUSC7.1-201ENST00000610969 165 ntBASIC4.66□□□□□ -1.66
MMP3P08254 OR1S1-201ENST00000624470 978 ntBASIC4.66□□□□□ -1.66
MMP3P08254 AC079416.3-201ENST00000624479 549 ntBASIC4.66□□□□□ -1.66
MMP3P08254 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.66□□□□□ -1.66
MMP3P08254 AF001550.2-201ENST00000636643 217 ntBASIC4.66□□□□□ -1.66
MMP3P08254 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.66□□□□□ -1.66
MMP3P08254 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
MMP3P08254 AC116667.1-201ENST00000604855 2072 ntBASIC4.66□□□□□ -1.66
MMP3P08254 THAP12P5-201ENST00000405864 2275 ntBASIC4.66□□□□□ -1.66
MMP3P08254 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
MMP3P08254 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MMP3P08254 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MMP3P08254 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.65□□□□□ -1.66
MMP3P08254 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
MMP3P08254 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.65□□□□□ -1.66
MMP3P08254 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
MMP3P08254 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.65□□□□□ -1.66
MMP3P08254 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
MMP3P08254 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
MMP3P08254 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
MMP3P08254 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
MMP3P08254 NACA3P-201ENST00000359690 648 ntBASIC4.65□□□□□ -1.67
MMP3P08254 Y_RNA.169-201ENST00000363745 96 ntBASIC4.65□□□□□ -1.67
MMP3P08254 OR1L1-202ENST00000373686 1083 ntBASIC4.65□□□□□ -1.67
MMP3P08254 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
MMP3P08254 SNORD116-2-201ENST00000384274 95 ntBASIC4.65□□□□□ -1.67
MMP3P08254 SNORD116-6-201ENST00000384711 96 ntBASIC4.65□□□□□ -1.67
MMP3P08254 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.65□□□□□ -1.67
MMP3P08254 ERHP2-201ENST00000402323 299 ntBASIC4.65□□□□□ -1.67
MMP3P08254 SFR1P1-201ENST00000403720 688 ntBASIC4.65□□□□□ -1.67
MMP3P08254 MIR1179-201ENST00000408703 91 ntBASIC4.65□□□□□ -1.67
MMP3P08254 RN7SKP159-201ENST00000410657 292 ntBASIC4.65□□□□□ -1.67
MMP3P08254 RNU6-575P-201ENST00000411326 105 ntBASIC4.65□□□□□ -1.67
MMP3P08254 VDAC1P9-201ENST00000412766 841 ntBASIC4.65□□□□□ -1.67
MMP3P08254 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.65□□□□□ -1.67
MMP3P08254 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.65□□□□□ -1.67
MMP3P08254 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.65□□□□□ -1.67
MMP3P08254 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.65□□□□□ -1.67
MMP3P08254 RPS6P15-201ENST00000431996 751 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms