Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TPTE2P6-202ENST00000445572 1007 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 TDGF1P1-201ENST00000445734 527 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 NUTF2P3-201ENST00000448540 384 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 CDY23P-201ENST00000451661 1014 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 MRPL42P4-201ENST00000453267 443 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 GAPDHP36-201ENST00000480688 918 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 SUMO2P4-201ENST00000504193 276 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC023632.1-201ENST00000518463 375 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 MIR3912-201ENST00000577566 105 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC091178.1-203ENST00000584586 279 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AP003465.2-201ENST00000602571 373 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 U73023.1-201ENST00000603134 700 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 BNIP3P4-201ENST00000604946 565 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AP002360.4-201ENST00000606980 481 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC131235.4-201ENST00000609288 620 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC068831.8-201ENST00000620171 435 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC009878.1-201ENST00000621819 340 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC109454.4-201ENST00000623411 649 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AL160394.1-201ENST00000624765 724 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC063952.1-203ENST00000634410 658 ntBASIC5.28□□□□□ -1.56
HLA-DOAP06340 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DOAP06340 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DOAP06340 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DOAP06340 EIF2AP4-201ENST00000424793 1781 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 MTND5P24-201ENST00000438892 1767 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DOAP06340 U3.4-201ENST00000363352 213 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 RNU1-83P-201ENST00000363426 164 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 RNU6-560P-201ENST00000364007 108 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 Y_RNA.408-201ENST00000383987 102 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 U3.23-201ENST00000391132 200 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DOAP06340 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DOAP06340 RPL23AP26-201ENST00000412728 464 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 ELOCP17-201ENST00000414751 326 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DOAP06340 GTF2IP23-201ENST00000423746 351 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 RPL7P29-201ENST00000437151 728 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC079776.3-201ENST00000450665 370 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 NUTF2P7-201ENST00000453086 375 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 UQCRHP4-201ENST00000471686 272 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC011825.1-201ENST00000484967 388 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC090515.3-201ENST00000560431 315 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 COX6CP4-201ENST00000605798 228 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AP005137.2-201ENST00000609238 400 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AL445567.2-201ENST00000618935 498 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC022509.4-201ENST00000621404 572 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AL590240.3-201ENST00000621416 943 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AL603750.1-201ENST00000624216 1717 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC116618.1-201ENST00000634617 774 ntBASIC5.27□□□□□ -1.57
HLA-DOAP06340 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DOAP06340 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HLA-DOAP06340 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.27□□□□□ -1.57
HLA-DOAP06340 AC012078.1-201ENST00000405035 1646 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 Y_RNA.41-201ENST00000362646 102 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms