Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 MIR4644-201ENST00000579929 84 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC092354.2-201ENST00000607786 514 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC116447.1-201ENST00000613153 453 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 AC058791.1-201ENST00000608412 3198 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 HSPA8P19-201ENST00000505359 1517 ntBASIC3.43□□□□□ -1.86
HLA-DQB2P05538 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQB2P05538 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 MT-TP-201ENST00000387461 68 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 RNU6-603P-201ENST00000411403 107 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 ARL4AP4-201ENST00000434170 518 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 CYCSP43-201ENST00000438233 310 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AL645939.1-201ENST00000453429 797 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC021205.2-201ENST00000480069 347 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 RN7SL293P-201ENST00000481765 281 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC093663.1-201ENST00000497190 394 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 RPL7P47-201ENST00000497299 556 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 IGKV2D-23-201ENST00000518179 286 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 HMGB1P23-201ENST00000518743 568 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 EIF4EP5-201ENST00000528228 640 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AL139174.1-201ENST00000531489 886 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC011602.1-201ENST00000546484 331 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC091515.1-201ENST00000548110 679 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 CCNG2P1-201ENST00000549521 1000 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC009101.1-201ENST00000568135 242 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 MIR5186-201ENST00000577504 120 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 MIR1254-2-201ENST00000579553 63 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC010680.3-201ENST00000604215 520 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DQB2P05538 RMST_8.1-201ENST00000610287 165 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 AC000123.2-201ENST00000623124 461 ntBASIC3.42□□□□□ -1.86
HLA-DQB2P05538 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 PWAR6-201ENST00000552334 4618 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 Y_RNA.62-201ENST00000362840 99 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 RNA5SP50-201ENST00000363731 107 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 MIR449B-201ENST00000384995 97 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 RANP4-201ENST00000413361 655 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 RAB28P3-201ENST00000448325 597 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AL354710.1-201ENST00000453641 246 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 MTCYBP14-201ENST00000457471 715 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 LARP7P4-201ENST00000481075 878 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 RN7SKP60-201ENST00000516985 239 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 MIR4429-201ENST00000580105 73 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AC090953.1-201ENST00000604305 1092 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AL365503.1-201ENST00000605247 905 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AC007620.3-201ENST00000608131 497 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AL391261.4-201ENST00000616012 481 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AL355365.1-201ENST00000616480 294 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AL049781.1-201ENST00000623195 3585 ntBASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DQB2P05538 AC017071.1-201ENST00000564407 2204 ntBASIC3.4□□□□□ -1.86
HLA-DQB2P05538 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms