Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPSAP41-201ENST00000439695 860 ntBASIC2.01□□□□□ -2.09
APOBP04114 AC099560.2-201ENST00000457554 255 ntBASIC2.01□□□□□ -2.09
APOBP04114 AC110794.1-201ENST00000505816 425 ntBASIC2.01□□□□□ -2.09
APOBP04114 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.01□□□□□ -2.09
APOBP04114 RNU6-991P-201ENST00000516168 107 ntBASIC2.01□□□□□ -2.09
APOBP04114 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.01□□□□□ -2.09
APOBP04114 RN7SL371P-201ENST00000578099 267 ntBASIC2.01□□□□□ -2.09
APOBP04114 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
APOBP04114 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.01□□□□□ -2.09
APOBP04114 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
APOBP04114 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
APOBP04114 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC2.01□□□□□ -2.09
APOBP04114 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
APOBP04114 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
APOBP04114 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2□□□□□ -2.09
APOBP04114 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2□□□□□ -2.09
APOBP04114 RPL37P4-201ENST00000448908 268 ntBASIC2□□□□□ -2.09
APOBP04114 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC2□□□□□ -2.09
APOBP04114 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 AL360157.1-201ENST00000565962 87 ntBASIC2□□□□□ -2.09
APOBP04114 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2□□□□□ -2.09
APOBP04114 AC241585.2-209ENST00000638217 143 ntBASIC2□□□□□ -2.09
APOBP04114 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
APOBP04114 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2□□□□□ -2.09
APOBP04114 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2□□□□□ -2.09
APOBP04114 FAM35BP-202ENST00000497389 3337 ntBASIC2□□□□□ -2.09
APOBP04114 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 RNA5SP104-201ENST00000410989 118 ntBASIC2□□□□□ -2.09
APOBP04114 DPPA2P2-201ENST00000418220 897 ntBASIC2□□□□□ -2.09
APOBP04114 AL353678.1-201ENST00000422735 741 ntBASIC2□□□□□ -2.09
APOBP04114 AL035407.1-201ENST00000429211 571 ntBASIC2□□□□□ -2.09
APOBP04114 YWHAEP5-201ENST00000431545 765 ntBASIC2□□□□□ -2.09
APOBP04114 AC074367.1-201ENST00000438685 1125 ntBASIC2□□□□□ -2.09
APOBP04114 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2□□□□□ -2.09
APOBP04114 RN7SL20P-201ENST00000488827 297 ntBASIC2□□□□□ -2.09
APOBP04114 AC244517.3-201ENST00000616254 1235 ntBASIC2□□□□□ -2.09
APOBP04114 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2□□□□□ -2.09
APOBP04114 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 AL356057.1-202ENST00000402263 756 ntBASIC2□□□□□ -2.09
APOBP04114 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2□□□□□ -2.09
APOBP04114 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 Y_RNA.676-201ENST00000516393 96 ntBASIC2□□□□□ -2.09
APOBP04114 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2□□□□□ -2.09
APOBP04114 CYP2C60P-201ENST00000566088 139 ntBASIC2□□□□□ -2.09
APOBP04114 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2□□□□□ -2.09
APOBP04114 AP004607.9-201ENST00000618202 316 ntBASIC2□□□□□ -2.09
APOBP04114 AL732372.2-225ENST00000642124 456 ntBASIC2□□□□□ -2.09
APOBP04114 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2□□□□□ -2.09
APOBP04114 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC2□□□□□ -2.09
APOBP04114 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2□□□□□ -2.09
APOBP04114 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2□□□□□ -2.09
APOBP04114 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
APOBP04114 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
APOBP04114 AP002088.1-201ENST00000382740 395 ntBASIC2□□□□□ -2.09
APOBP04114 AC022018.1-201ENST00000430685 241 ntBASIC2□□□□□ -2.09
APOBP04114 AC009812.2-201ENST00000517657 457 ntBASIC2□□□□□ -2.09
APOBP04114 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
APOBP04114 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2□□□□□ -2.09
APOBP04114 AL162574.2-201ENST00000614618 657 ntBASIC2□□□□□ -2.09
APOBP04114 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2□□□□□ -2.09
APOBP04114 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC1.99□□□□□ -2.09
APOBP04114 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
APOBP04114 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC1.99□□□□□ -2.09
APOBP04114 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
APOBP04114 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
APOBP04114 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.99□□□□□ -2.09
APOBP04114 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
APOBP04114 MAPK10-362ENST00000641864 4484 ntBASIC1.99□□□□□ -2.09
APOBP04114 MIR93-201ENST00000385024 80 ntBASIC1.99□□□□□ -2.09
APOBP04114 MIR887-201ENST00000401258 79 ntBASIC1.99□□□□□ -2.09
APOBP04114 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC1.99□□□□□ -2.09
APOBP04114 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC1.99□□□□□ -2.09
APOBP04114 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC1.99□□□□□ -2.09
APOBP04114 APOOP4-201ENST00000513530 597 ntBASIC1.99□□□□□ -2.09
APOBP04114 AP002404.1-201ENST00000532005 451 ntBASIC1.99□□□□□ -2.09
APOBP04114 ATP1B3P1-201ENST00000605365 821 ntBASIC1.99□□□□□ -2.09
APOBP04114 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC1.99□□□□□ -2.09
APOBP04114 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.99□□□□□ -2.09
APOBP04114 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
APOBP04114 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC1.99□□□□□ -2.09
APOBP04114 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
APOBP04114 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.99□□□□□ -2.09
APOBP04114 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
APOBP04114 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
APOBP04114 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC1.99□□□□□ -2.09
APOBP04114 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
APOBP04114 MRPL50P2-201ENST00000416821 482 ntBASIC1.99□□□□□ -2.09
APOBP04114 NPM1P11-201ENST00000417106 855 ntBASIC1.99□□□□□ -2.09
APOBP04114 GNG5P5-201ENST00000420444 220 ntBASIC1.99□□□□□ -2.09
APOBP04114 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.99□□□□□ -2.09
APOBP04114 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC1.99□□□□□ -2.09
APOBP04114 METTL15P1-201ENST00000481421 1045 ntBASIC1.99□□□□□ -2.09
APOBP04114 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
APOBP04114 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.99□□□□□ -2.09
APOBP04114 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms