Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RN7SKP106-201ENST00000410832 272 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AC092745.2-202ENST00000411880 369 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AL591848.1-201ENST00000413092 322 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AC027644.1-201ENST00000419595 298 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.05□□□□□ -1.76
CLPTM1O96005 RPL30P3-201ENST00000424262 333 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 MTCO2P20-201ENST00000437339 673 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.05□□□□□ -1.76
CLPTM1O96005 MTCYBP31-201ENST00000438855 1122 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.05□□□□□ -1.76
CLPTM1O96005 H2AFZP5-201ENST00000446960 382 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 MTCYBP11-201ENST00000447254 1109 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AC112492.1-201ENST00000449607 712 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.05□□□□□ -1.76
CLPTM1O96005 TRBV8-2-201ENST00000475637 270 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AC091959.2-201ENST00000477363 321 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AC007686.1-201ENST00000488511 463 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.05□□□□□ -1.76
CLPTM1O96005 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.05□□□□□ -1.76
CLPTM1O96005 snoZ278.1-201ENST00000517059 112 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 MRPS36P3-201ENST00000519284 130 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLPTM1O96005 MTCO3P15-201ENST00000526563 574 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 OR4A2P-201ENST00000527276 913 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 DEFB130C-202ENST00000530001 230 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.05□□□□□ -1.76
CLPTM1O96005 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.05□□□□□ -1.76
CLPTM1O96005 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.05□□□□□ -1.76
CLPTM1O96005 MTND3P13-201ENST00000574391 343 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 RN7SL652P-201ENST00000577769 300 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 VN1R78P-201ENST00000597393 564 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AL020997.3-201ENST00000602843 359 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 BNIP3P4-201ENST00000604946 565 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AP003392.5-201ENST00000607857 415 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 AL138478.1-201ENST00000612252 832 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 uc_338.9-201ENST00000617424 182 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLPTM1O96005 AC022079.1-201ENST00000621546 602 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 MTND2P41-201ENST00000637599 773 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.05□□□□□ -1.76
CLPTM1O96005 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLPTM1O96005 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.05□□□□□ -1.76
CLPTM1O96005 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.05□□□□□ -1.76
CLPTM1O96005 BDP1P-201ENST00000582658 1990 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLPTM1O96005 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
CLPTM1O96005 AC025125.1-201ENST00000624743 1922 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 CPHL1P-201ENST00000461341 3407 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLPTM1O96005 AC012618.3-205ENST00000637896 1496 ntBASIC4.05□□□□□ -1.76
CLPTM1O96005 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 RNF6P1-201ENST00000444889 1784 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.04□□□□□ -1.76
CLPTM1O96005 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.04□□□□□ -1.76
CLPTM1O96005 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 RNU1-87P-201ENST00000363727 170 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.04□□□□□ -1.76
CLPTM1O96005 RNU6-549P-201ENST00000384433 107 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.04□□□□□ -1.76
CLPTM1O96005 RHEBP3-201ENST00000411920 351 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.04□□□□□ -1.76
CLPTM1O96005 RPS24P7-201ENST00000416921 246 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AL356320.2-201ENST00000417263 507 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 RPS12P23-201ENST00000419579 400 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC010099.3-201ENST00000423896 409 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AL365396.1-201ENST00000430854 671 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 RPEP2-201ENST00000432149 701 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 HMGB3P6-201ENST00000444896 598 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 MTATP6P26-201ENST00000445926 662 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC073264.2-201ENST00000448886 166 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 NPM1P13-201ENST00000452663 865 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AC005229.2-201ENST00000456995 399 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.04□□□□□ -1.76
CLPTM1O96005 USP9YP25-201ENST00000457708 443 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 RN7SL354P-201ENST00000469282 294 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC068305.1-201ENST00000497406 726 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC092593.2-201ENST00000513866 913 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.04□□□□□ -1.76
CLPTM1O96005 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.04□□□□□ -1.76
CLPTM1O96005 AP001636.2-201ENST00000525517 696 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 MTATP6P15-201ENST00000527233 835 ntBASIC4.04□□□□□ -1.76
CLPTM1O96005 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms