Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MIR3157-201ENST00000578688 85 ntBASIC7.17□□□□□ -1.26
RNF40O75150 MIR212-201ENST00000586026 110 ntBASIC7.17□□□□□ -1.26
RNF40O75150 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC7.17□□□□□ -1.26
RNF40O75150 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF40O75150 AC011500.1-201ENST00000601963 469 ntBASIC7.17□□□□□ -1.26
RNF40O75150 AC103705.1-201ENST00000619013 241 ntBASIC7.17□□□□□ -1.26
RNF40O75150 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.17□□□□□ -1.26
RNF40O75150 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
RNF40O75150 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.17□□□□□ -1.26
RNF40O75150 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RNF40O75150 AL731556.1-201ENST00000394628 3711 ntBASIC7.17□□□□□ -1.26
RNF40O75150 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RNF40O75150 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RNF40O75150 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF40O75150 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RNF40O75150 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RNF40O75150 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.16□□□□□ -1.26
RNF40O75150 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RNF40O75150 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF40O75150 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF40O75150 AL161781.1-201ENST00000354277 403 ntBASIC7.16□□□□□ -1.26
RNF40O75150 RN7SKP130-201ENST00000364924 301 ntBASIC7.16□□□□□ -1.26
RNF40O75150 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF40O75150 SNORA7A-201ENST00000384765 139 ntBASIC7.16□□□□□ -1.26
RNF40O75150 AL031985.1-201ENST00000392713 418 ntBASIC7.16□□□□□ -1.26
RNF40O75150 EIF5P1-201ENST00000400019 1231 ntBASIC7.16□□□□□ -1.26
RNF40O75150 RNA5SP155-201ENST00000411154 129 ntBASIC7.16□□□□□ -1.26
RNF40O75150 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.16□□□□□ -1.26
RNF40O75150 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF40O75150 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.16□□□□□ -1.26
RNF40O75150 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF40O75150 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF40O75150 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF40O75150 RN7SL797P-201ENST00000486314 297 ntBASIC7.16□□□□□ -1.26
RNF40O75150 AC015524.1-201ENST00000491585 472 ntBASIC7.16□□□□□ -1.26
RNF40O75150 AC021146.3-201ENST00000511911 260 ntBASIC7.16□□□□□ -1.26
RNF40O75150 Y_RNA.703-201ENST00000516846 111 ntBASIC7.16□□□□□ -1.26
RNF40O75150 Y_RNA.715-201ENST00000517082 110 ntBASIC7.16□□□□□ -1.26
RNF40O75150 SETP7-201ENST00000552169 453 ntBASIC7.16□□□□□ -1.26
RNF40O75150 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF40O75150 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RNF40O75150 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF40O75150 AL356274.1-201ENST00000617064 410 ntBASIC7.16□□□□□ -1.26
RNF40O75150 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.16□□□□□ -1.26
RNF40O75150 AC011155.2-201ENST00000623202 216 ntBASIC7.16□□□□□ -1.26
RNF40O75150 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RNF40O75150 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF40O75150 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF40O75150 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF40O75150 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF40O75150 AC005225.5-201ENST00000623547 2225 ntBASIC7.16□□□□□ -1.26
RNF40O75150 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF40O75150 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RNF40O75150 AC068769.1-201ENST00000474767 2426 ntBASIC7.16□□□□□ -1.26
RNF40O75150 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RNF40O75150 AC093775.1-201ENST00000624154 1868 ntBASIC7.15□□□□□ -1.26
RNF40O75150 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RNF40O75150 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
RNF40O75150 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
RNF40O75150 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RNF40O75150 RN7SKP107-201ENST00000364157 290 ntBASIC7.15□□□□□ -1.26
RNF40O75150 RN7SKP171-201ENST00000364417 303 ntBASIC7.15□□□□□ -1.26
RNF40O75150 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RNF40O75150 AC026310.1-201ENST00000396004 378 ntBASIC7.15□□□□□ -1.26
RNF40O75150 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RNF40O75150 DSTNP4-201ENST00000399472 474 ntBASIC7.15□□□□□ -1.26
RNF40O75150 PPIAP9-201ENST00000403866 498 ntBASIC7.15□□□□□ -1.26
RNF40O75150 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC7.15□□□□□ -1.26
RNF40O75150 UQCRHP1-204ENST00000424609 274 ntBASIC7.15□□□□□ -1.26
RNF40O75150 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF40O75150 AC003989.1-201ENST00000434569 565 ntBASIC7.15□□□□□ -1.26
RNF40O75150 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF40O75150 MYL6P3-201ENST00000436904 432 ntBASIC7.15□□□□□ -1.26
RNF40O75150 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.15□□□□□ -1.26
RNF40O75150 AL353752.1-201ENST00000454946 260 ntBASIC7.15□□□□□ -1.26
RNF40O75150 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF40O75150 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
RNF40O75150 AC114801.2-201ENST00000503825 781 ntBASIC7.15□□□□□ -1.26
RNF40O75150 AC022493.2-201ENST00000506122 481 ntBASIC7.15□□□□□ -1.26
RNF40O75150 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.15□□□□□ -1.26
RNF40O75150 RNA5SP473-201ENST00000516402 125 ntBASIC7.15□□□□□ -1.26
RNF40O75150 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF40O75150 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF40O75150 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF40O75150 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF40O75150 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF40O75150 AL359091.2-201ENST00000609303 556 ntBASIC7.15□□□□□ -1.26
RNF40O75150 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF40O75150 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.15□□□□□ -1.26
RNF40O75150 AC244100.1-202ENST00000621554 382 ntBASIC7.15□□□□□ -1.26
RNF40O75150 CDRT1-208ENST00000630868 794 ntBASIC7.15□□□□□ -1.26
RNF40O75150 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF40O75150 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF40O75150 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
RNF40O75150 AC002525.1-201ENST00000624392 1622 ntBASIC7.15□□□□□ -1.27
RNF40O75150 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF40O75150 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RNF40O75150 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
RNF40O75150 CASC19-204ENST00000641001 2055 ntBASIC7.15□□□□□ -1.27
RNF40O75150 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms