Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.67□□□□□ -1.82
SHOX2O60902 MTCO1P49-201ENST00000523429 802 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AC138701.1-201ENST00000524329 714 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.67□□□□□ -1.82
SHOX2O60902 AP000926.4-201ENST00000527351 454 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.67□□□□□ -1.82
SHOX2O60902 AC026333.2-201ENST00000542164 106 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AC017100.2-201ENST00000584628 355 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AL356218.2-201ENST00000605264 187 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 ARF4P1-201ENST00000605447 541 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AC099778.2-201ENST00000610904 211 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AC004777.1-201ENST00000624317 287 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AL355596.1-201ENST00000565399 3996 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
SHOX2O60902 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHOX2O60902 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHOX2O60902 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHOX2O60902 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SHOX2O60902 SRP72P2-201ENST00000344851 1979 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.66□□□□□ -1.82
SHOX2O60902 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHOX2O60902 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.66□□□□□ -1.82
SHOX2O60902 RNU6-532P-201ENST00000384318 107 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.66□□□□□ -1.82
SHOX2O60902 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.66□□□□□ -1.82
SHOX2O60902 RPL23AP38-201ENST00000423801 469 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHOX2O60902 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHOX2O60902 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.66□□□□□ -1.82
SHOX2O60902 TBCAP1-201ENST00000436520 327 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHOX2O60902 RNU7-27P-201ENST00000459281 62 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 RPL5P13-201ENST00000462840 709 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 HMGN1P8-201ENST00000463578 288 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
SHOX2O60902 AC011037.1-201ENST00000483964 558 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 AC091167.1-201ENST00000492017 396 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 AL035404.1-201ENST00000497982 568 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.66□□□□□ -1.82
SHOX2O60902 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.66□□□□□ -1.82
SHOX2O60902 RNU6-579P-201ENST00000516879 102 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 MIR2116-201ENST00000517221 80 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.66□□□□□ -1.82
SHOX2O60902 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.66□□□□□ -1.82
SHOX2O60902 AL049874.4-201ENST00000557593 255 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.66□□□□□ -1.82
SHOX2O60902 AC006130.2-201ENST00000586202 326 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.66□□□□□ -1.82
SHOX2O60902 AF131215.7-201ENST00000602443 707 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 AC107294.3-201ENST00000609211 526 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 uc_338.9-201ENST00000617424 182 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 AC139769.3-201ENST00000618383 175 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 AC091953.5-201ENST00000622919 233 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.66□□□□□ -1.82
SHOX2O60902 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SHOX2O60902 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SHOX2O60902 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHOX2O60902 AC024560.2-201ENST00000507981 1497 ntBASIC3.66□□□□□ -1.82
SHOX2O60902 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.65□□□□□ -1.82
SHOX2O60902 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.65□□□□□ -1.82
SHOX2O60902 AC007496.3-201ENST00000624987 3443 ntBASIC3.65□□□□□ -1.82
SHOX2O60902 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
SHOX2O60902 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SHOX2O60902 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
SHOX2O60902 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHOX2O60902 OR4K17-201ENST00000315543 1032 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.65□□□□□ -1.83
SHOX2O60902 U3.39-201ENST00000408569 239 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.65□□□□□ -1.83
SHOX2O60902 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHOX2O60902 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.65□□□□□ -1.83
SHOX2O60902 SDCBPP2-201ENST00000424643 885 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 ISCA1P2-201ENST00000438679 421 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHOX2O60902 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.65□□□□□ -1.83
SHOX2O60902 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.65□□□□□ -1.83
SHOX2O60902 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.65□□□□□ -1.83
SHOX2O60902 AC010618.1-201ENST00000469924 477 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
SHOX2O60902 AC093840.1-201ENST00000511599 336 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.65□□□□□ -1.83
SHOX2O60902 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.65□□□□□ -1.83
SHOX2O60902 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHOX2O60902 AC093014.1-201ENST00000548926 724 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 TRAV15-201ENST00000556680 249 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AC027807.1-201ENST00000559921 996 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.65□□□□□ -1.83
SHOX2O60902 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.65□□□□□ -1.83
SHOX2O60902 AC022884.3-201ENST00000579571 248 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHOX2O60902 VN1R92P-201ENST00000598511 928 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 IPO5P1-202ENST00000600039 287 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AL161756.2-201ENST00000604597 246 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AL354760.1-201ENST00000608357 643 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AC023043.4-201ENST00000612081 449 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AC024023.1-201ENST00000624530 922 ntBASIC3.65□□□□□ -1.83
SHOX2O60902 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.65□□□□□ -1.83
SHOX2O60902 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHOX2O60902 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHOX2O60902 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms