Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ACTR3P2-201ENST00000439585 1257 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKNO60260 AL133217.1-201ENST00000450980 425 ntBASIC4.01□□□□□ -1.77
PRKNO60260 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKNO60260 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKNO60260 ANKRD26P4-201ENST00000455755 950 ntBASIC4.01□□□□□ -1.77
PRKNO60260 RN7SL812P-201ENST00000493791 279 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AC005912.1-201ENST00000495392 255 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.01□□□□□ -1.77
PRKNO60260 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKNO60260 AC008837.2-201ENST00000513076 418 ntBASIC4.01□□□□□ -1.77
PRKNO60260 Y_RNA.688-201ENST00000516565 95 ntBASIC4.01□□□□□ -1.77
PRKNO60260 RN7SKP283-201ENST00000517197 270 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKNO60260 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKNO60260 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.01□□□□□ -1.77
PRKNO60260 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKNO60260 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKNO60260 ATP5J2P6-201ENST00000565203 266 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.01□□□□□ -1.77
PRKNO60260 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.01□□□□□ -1.77
PRKNO60260 AC011477.5-201ENST00000586571 259 ntBASIC4.01□□□□□ -1.77
PRKNO60260 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKNO60260 AL109653.1-201ENST00000603091 248 ntBASIC4.01□□□□□ -1.77
PRKNO60260 NTAN1P1-201ENST00000603150 646 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AL360219.1-201ENST00000610230 366 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AL021997.2-201ENST00000615674 271 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AL445567.2-201ENST00000618935 498 ntBASIC4.01□□□□□ -1.77
PRKNO60260 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKNO60260 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.01□□□□□ -1.77
PRKNO60260 AP003399.1-201ENST00000637534 361 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AC015813.6-201ENST00000624409 5808 ntBASIC4.01□□□□□ -1.77
PRKNO60260 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.01□□□□□ -1.77
PRKNO60260 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRKNO60260 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKNO60260 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.01□□□□□ -1.77
PRKNO60260 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRKNO60260 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKNO60260 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.01□□□□□ -1.77
PRKNO60260 AC096656.1-201ENST00000623826 1364 ntBASIC4.01□□□□□ -1.77
PRKNO60260 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.01□□□□□ -1.77
PRKNO60260 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PRKNO60260 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 MAPK10-286ENST00000641208 8747 ntBASIC4□□□□□ -1.77
PRKNO60260 AC009313.2-201ENST00000417893 1941 ntBASIC4□□□□□ -1.77
PRKNO60260 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PRKNO60260 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 RNA5SP175-201ENST00000364275 119 ntBASIC4□□□□□ -1.77
PRKNO60260 SNORA70.2-201ENST00000364506 135 ntBASIC4□□□□□ -1.77
PRKNO60260 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4□□□□□ -1.77
PRKNO60260 AL161909.1-201ENST00000397390 712 ntBASIC4□□□□□ -1.77
PRKNO60260 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4□□□□□ -1.77
PRKNO60260 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4□□□□□ -1.77
PRKNO60260 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4□□□□□ -1.77
PRKNO60260 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4□□□□□ -1.77
PRKNO60260 AC006960.1-201ENST00000419980 153 ntBASIC4□□□□□ -1.77
PRKNO60260 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4□□□□□ -1.77
PRKNO60260 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4□□□□□ -1.77
PRKNO60260 AL157831.1-201ENST00000426134 473 ntBASIC4□□□□□ -1.77
PRKNO60260 RPS26P47-201ENST00000427219 348 ntBASIC4□□□□□ -1.77
PRKNO60260 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4□□□□□ -1.77
PRKNO60260 MTND1P32-201ENST00000433043 938 ntBASIC4□□□□□ -1.77
PRKNO60260 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4□□□□□ -1.77
PRKNO60260 TRIM60P9Y-201ENST00000438459 816 ntBASIC4□□□□□ -1.77
PRKNO60260 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4□□□□□ -1.77
PRKNO60260 TRIM60P11Y-201ENST00000445313 801 ntBASIC4□□□□□ -1.77
PRKNO60260 NUTF2P3-201ENST00000448540 384 ntBASIC4□□□□□ -1.77
PRKNO60260 VN1R32P-201ENST00000452234 905 ntBASIC4□□□□□ -1.77
PRKNO60260 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4□□□□□ -1.77
PRKNO60260 AC015724.1-201ENST00000478577 156 ntBASIC4□□□□□ -1.77
PRKNO60260 AC105137.1-201ENST00000484355 562 ntBASIC4□□□□□ -1.77
PRKNO60260 AC091167.1-201ENST00000492017 396 ntBASIC4□□□□□ -1.77
PRKNO60260 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4□□□□□ -1.77
PRKNO60260 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4□□□□□ -1.77
PRKNO60260 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PRKNO60260 AC008958.1-201ENST00000511047 682 ntBASIC4□□□□□ -1.77
PRKNO60260 MRPS33P3-201ENST00000513456 322 ntBASIC4□□□□□ -1.77
PRKNO60260 RNU6-1129P-201ENST00000515964 104 ntBASIC4□□□□□ -1.77
PRKNO60260 RNA5SP49-201ENST00000516450 115 ntBASIC4□□□□□ -1.77
PRKNO60260 RNA5SP519-201ENST00000516480 119 ntBASIC4□□□□□ -1.77
PRKNO60260 RNU6-347P-201ENST00000516658 105 ntBASIC4□□□□□ -1.77
PRKNO60260 IGLV3-26-201ENST00000520756 302 ntBASIC4□□□□□ -1.77
PRKNO60260 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4□□□□□ -1.77
PRKNO60260 COX6B1P6-201ENST00000522347 255 ntBASIC4□□□□□ -1.77
PRKNO60260 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4□□□□□ -1.77
PRKNO60260 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4□□□□□ -1.77
PRKNO60260 AP001317.1-201ENST00000531194 960 ntBASIC4□□□□□ -1.77
PRKNO60260 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4□□□□□ -1.77
PRKNO60260 TVP23BP1-201ENST00000557500 617 ntBASIC4□□□□□ -1.77
PRKNO60260 AC068714.1-201ENST00000559623 800 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms