Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 AC074029.1-201ENST00000552531 1044 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AC093249.4-201ENST00000564755 259 ntBASIC4.1□□□□□ -1.75
SSX4O60224 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 AC093519.1-201ENST00000566109 298 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX4O60224 AC069366.1-201ENST00000583159 838 ntBASIC4.1□□□□□ -1.75
SSX4O60224 MIR5096-201ENST00000583713 70 ntBASIC4.1□□□□□ -1.75
SSX4O60224 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX4O60224 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 HSPE1P14-201ENST00000605812 302 ntBASIC4.1□□□□□ -1.75
SSX4O60224 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSX4O60224 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 AL022401.1-201ENST00000619498 108 ntBASIC4.1□□□□□ -1.75
SSX4O60224 CR381572.2-201ENST00000624852 397 ntBASIC4.1□□□□□ -1.75
SSX4O60224 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX4O60224 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
SSX4O60224 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 ERCC6-202ENST00000374127 1782 ntBASIC4.09□□□□□ -1.75
SSX4O60224 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX4O60224 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SSX4O60224 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX4O60224 AC026951.1-201ENST00000559530 2459 ntBASIC4.09□□□□□ -1.75
SSX4O60224 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX4O60224 OR56B2P-201ENST00000317102 954 ntBASIC4.09□□□□□ -1.75
SSX4O60224 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX4O60224 RPL23AP48-201ENST00000406913 488 ntBASIC4.09□□□□□ -1.75
SSX4O60224 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX4O60224 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX4O60224 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX4O60224 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX4O60224 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.09□□□□□ -1.75
SSX4O60224 AC133473.1-201ENST00000455173 299 ntBASIC4.09□□□□□ -1.75
SSX4O60224 MTND2P28-201ENST00000457540 1044 ntBASIC4.09□□□□□ -1.75
SSX4O60224 RPS23P7-201ENST00000466210 444 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX4O60224 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX4O60224 AC012158.1-204ENST00000483430 465 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC090013.1-201ENST00000485147 480 ntBASIC4.09□□□□□ -1.75
SSX4O60224 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX4O60224 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX4O60224 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX4O60224 HMGB1P21-201ENST00000502313 581 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX4O60224 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX4O60224 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX4O60224 AC093755.1-201ENST00000512950 1023 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC087808.1-201ENST00000520501 361 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX4O60224 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX4O60224 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.09□□□□□ -1.75
SSX4O60224 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.09□□□□□ -1.75
SSX4O60224 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX4O60224 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.09□□□□□ -1.75
SSX4O60224 PARP1P2-201ENST00000556806 195 ntBASIC4.09□□□□□ -1.75
SSX4O60224 HNRNPCP4-201ENST00000571636 900 ntBASIC4.09□□□□□ -1.75
SSX4O60224 MIR4504-201ENST00000577413 92 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX4O60224 MIR4277-201ENST00000578298 84 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC067852.4-201ENST00000590314 478 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC091057.2-201ENST00000602594 792 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC068790.5-201ENST00000602741 355 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC022022.2-201ENST00000602989 360 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC113368.1-201ENST00000603736 382 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.09□□□□□ -1.75
SSX4O60224 AC023158.2-201ENST00000614876 543 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC083809.1-201ENST00000615051 472 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC022509.4-201ENST00000621404 572 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.09□□□□□ -1.75
SSX4O60224 AL512506.2-201ENST00000624472 458 ntBASIC4.09□□□□□ -1.75
SSX4O60224 AC068620.4-201ENST00000636730 1182 ntBASIC4.09□□□□□ -1.75
SSX4O60224 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
SSX4O60224 MTND5P31-201ENST00000419366 1374 ntBASIC4.09□□□□□ -1.75
SSX4O60224 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.09□□□□□ -1.75
SSX4O60224 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSX4O60224 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSX4O60224 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.09□□□□□ -1.76
SSX4O60224 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
SSX4O60224 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.08□□□□□ -1.76
SSX4O60224 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.08□□□□□ -1.76
SSX4O60224 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX4O60224 OR4K15-201ENST00000305051 1216 ntBASIC4.08□□□□□ -1.76
SSX4O60224 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSX4O60224 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX4O60224 U3.30-201ENST00000391308 210 ntBASIC4.08□□□□□ -1.76
SSX4O60224 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SSX4O60224 AL603766.1-201ENST00000407763 664 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AC004987.3-201ENST00000413879 771 ntBASIC4.08□□□□□ -1.76
SSX4O60224 AL161449.1-201ENST00000414531 1199 ntBASIC4.08□□□□□ -1.76
SSX4O60224 HIGD1AP15-201ENST00000416198 280 ntBASIC4.08□□□□□ -1.76
SSX4O60224 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX4O60224 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX4O60224 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX4O60224 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX4O60224 MRPS36P1-201ENST00000421291 307 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms