Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.37□□□□□ -1.87
SGCEO43556 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.37□□□□□ -1.87
SGCEO43556 AL354760.1-201ENST00000608357 643 ntBASIC3.37□□□□□ -1.87
SGCEO43556 ZYXP1-201ENST00000617638 118 ntBASIC3.37□□□□□ -1.87
SGCEO43556 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.37□□□□□ -1.87
SGCEO43556 MIR4278-201ENST00000636094 69 ntBASIC3.37□□□□□ -1.87
SGCEO43556 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
SGCEO43556 AC005183.1-201ENST00000603687 1979 ntBASIC3.37□□□□□ -1.87
SGCEO43556 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SGCEO43556 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SGCEO43556 AL049737.1-201ENST00000413920 1403 ntBASIC3.36□□□□□ -1.87
SGCEO43556 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.36□□□□□ -1.87
SGCEO43556 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.36□□□□□ -1.87
SGCEO43556 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SGCEO43556 RAD1P1-201ENST00000231383 813 ntBASIC3.36□□□□□ -1.87
SGCEO43556 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SGCEO43556 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SGCEO43556 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.36□□□□□ -1.87
SGCEO43556 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SGCEO43556 ZNF602P-201ENST00000405929 924 ntBASIC3.36□□□□□ -1.87
SGCEO43556 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.36□□□□□ -1.87
SGCEO43556 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.36□□□□□ -1.87
SGCEO43556 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.36□□□□□ -1.87
SGCEO43556 RPL21P89-201ENST00000444021 467 ntBASIC3.36□□□□□ -1.87
SGCEO43556 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.36□□□□□ -1.87
SGCEO43556 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.36□□□□□ -1.87
SGCEO43556 SNRPGP3-201ENST00000469405 227 ntBASIC3.36□□□□□ -1.87
SGCEO43556 RPL23AP44-201ENST00000482216 473 ntBASIC3.36□□□□□ -1.87
SGCEO43556 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.36□□□□□ -1.87
SGCEO43556 AC005921.1-201ENST00000510589 286 ntBASIC3.36□□□□□ -1.87
SGCEO43556 PHBP14-201ENST00000512887 367 ntBASIC3.36□□□□□ -1.87
SGCEO43556 AC108064.1-201ENST00000513791 460 ntBASIC3.36□□□□□ -1.87
SGCEO43556 RNA5SP164-201ENST00000516533 110 ntBASIC3.36□□□□□ -1.87
SGCEO43556 SOD1P3-201ENST00000518682 454 ntBASIC3.36□□□□□ -1.87
SGCEO43556 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.36□□□□□ -1.87
SGCEO43556 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.36□□□□□ -1.87
SGCEO43556 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.36□□□□□ -1.87
SGCEO43556 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.36□□□□□ -1.87
SGCEO43556 AC119501.1-201ENST00000603646 475 ntBASIC3.36□□□□□ -1.87
SGCEO43556 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
SGCEO43556 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.36□□□□□ -1.87
SGCEO43556 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.36□□□□□ -1.87
SGCEO43556 AC092326.2-201ENST00000624772 1561 ntBASIC3.36□□□□□ -1.87
SGCEO43556 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SGCEO43556 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SGCEO43556 AC022031.1-201ENST00000585985 2593 ntBASIC3.36□□□□□ -1.87
SGCEO43556 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.36□□□□□ -1.87
SGCEO43556 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.36□□□□□ -1.87
SGCEO43556 AC119744.1-201ENST00000454746 1715 ntBASIC3.36□□□□□ -1.87
SGCEO43556 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SGCEO43556 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SGCEO43556 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SGCEO43556 AC091152.2-201ENST00000591628 2569 ntBASIC3.35□□□□□ -1.87
SGCEO43556 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
SGCEO43556 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SGCEO43556 RNU4-23P-201ENST00000362839 140 ntBASIC3.35□□□□□ -1.87
SGCEO43556 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.35□□□□□ -1.87
SGCEO43556 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.35□□□□□ -1.87
SGCEO43556 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.35□□□□□ -1.87
SGCEO43556 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 CYCSP53-201ENST00000455540 265 ntBASIC3.35□□□□□ -1.87
SGCEO43556 AC096992.1-201ENST00000459808 709 ntBASIC3.35□□□□□ -1.87
SGCEO43556 TRBV8-2-201ENST00000475637 270 ntBASIC3.35□□□□□ -1.87
SGCEO43556 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.35□□□□□ -1.87
SGCEO43556 AC010460.1-201ENST00000507087 466 ntBASIC3.35□□□□□ -1.87
SGCEO43556 FABP5P6-201ENST00000510588 409 ntBASIC3.35□□□□□ -1.87
SGCEO43556 AC005351.1-201ENST00000511152 786 ntBASIC3.35□□□□□ -1.87
SGCEO43556 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 SUMO2P20-201ENST00000520803 283 ntBASIC3.35□□□□□ -1.87
SGCEO43556 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SGCEO43556 OR6C73P-201ENST00000546432 358 ntBASIC3.35□□□□□ -1.87
SGCEO43556 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.35□□□□□ -1.87
SGCEO43556 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.35□□□□□ -1.87
SGCEO43556 AL133247.2-201ENST00000603236 482 ntBASIC3.35□□□□□ -1.87
SGCEO43556 AL137849.1-201ENST00000604767 169 ntBASIC3.35□□□□□ -1.87
SGCEO43556 AC113194.1-201ENST00000606037 500 ntBASIC3.35□□□□□ -1.87
SGCEO43556 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.35□□□□□ -1.87
SGCEO43556 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SGCEO43556 MIR6864-201ENST00000617935 70 ntBASIC3.35□□□□□ -1.87
SGCEO43556 U6.48-201ENST00000618523 106 ntBASIC3.35□□□□□ -1.87
SGCEO43556 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.35□□□□□ -1.87
SGCEO43556 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SGCEO43556 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SGCEO43556 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SGCEO43556 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SGCEO43556 AC138915.3-201ENST00000562908 1389 ntBASIC3.35□□□□□ -1.87
SGCEO43556 AF127577.6-201ENST00000623352 2191 ntBASIC3.35□□□□□ -1.87
SGCEO43556 MTND5P3-201ENST00000438536 1800 ntBASIC3.35□□□□□ -1.87
SGCEO43556 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.35□□□□□ -1.87
SGCEO43556 AL592494.2-201ENST00000425455 1548 ntBASIC3.34□□□□□ -1.87
SGCEO43556 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
SGCEO43556 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms