Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.73□□□□□ -1.81
LSM1O15116 RNU1-32P-201ENST00000363937 159 ntBASIC3.73□□□□□ -1.81
LSM1O15116 RNA5SP130-201ENST00000364431 114 ntBASIC3.73□□□□□ -1.81
LSM1O15116 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LSM1O15116 SNORA70E-201ENST00000384492 135 ntBASIC3.73□□□□□ -1.81
LSM1O15116 MIR199A2-201ENST00000385289 110 ntBASIC3.73□□□□□ -1.81
LSM1O15116 RPL18P10-201ENST00000425606 538 ntBASIC3.73□□□□□ -1.81
LSM1O15116 AC098824.1-201ENST00000453565 980 ntBASIC3.73□□□□□ -1.81
LSM1O15116 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.73□□□□□ -1.81
LSM1O15116 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.73□□□□□ -1.81
LSM1O15116 TMEM248P1-201ENST00000510579 951 ntBASIC3.73□□□□□ -1.81
LSM1O15116 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.73□□□□□ -1.81
LSM1O15116 AC022784.5-201ENST00000522241 437 ntBASIC3.73□□□□□ -1.81
LSM1O15116 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.73□□□□□ -1.81
LSM1O15116 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.73□□□□□ -1.81
LSM1O15116 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.73□□□□□ -1.81
LSM1O15116 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.73□□□□□ -1.81
LSM1O15116 AC025016.1-201ENST00000616746 682 ntBASIC3.73□□□□□ -1.81
LSM1O15116 AC091905.1-201ENST00000624400 311 ntBASIC3.73□□□□□ -1.81
LSM1O15116 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LSM1O15116 OR52H1-202ENST00000641796 1061 ntBASIC3.73□□□□□ -1.81
LSM1O15116 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.73□□□□□ -1.81
LSM1O15116 AC006504.1-201ENST00000562493 3666 ntBASIC3.73□□□□□ -1.81
LSM1O15116 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LSM1O15116 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
LSM1O15116 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM1O15116 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.72□□□□□ -1.81
LSM1O15116 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LSM1O15116 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LSM1O15116 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LSM1O15116 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM1O15116 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LSM1O15116 RNU6-1293P-201ENST00000384077 107 ntBASIC3.72□□□□□ -1.81
LSM1O15116 MIR184-201ENST00000384962 84 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AL589655.1-201ENST00000405398 482 ntBASIC3.72□□□□□ -1.81
LSM1O15116 RPL21P109-201ENST00000422213 475 ntBASIC3.72□□□□□ -1.81
LSM1O15116 OR5AW1P-201ENST00000426334 1006 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AL590623.1-201ENST00000427864 105 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM1O15116 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM1O15116 AC073143.1-201ENST00000436316 395 ntBASIC3.72□□□□□ -1.81
LSM1O15116 NUTF2P3-201ENST00000448540 384 ntBASIC3.72□□□□□ -1.81
LSM1O15116 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LSM1O15116 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM1O15116 AC006463.2-201ENST00000473326 348 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AC084198.1-201ENST00000477747 402 ntBASIC3.72□□□□□ -1.81
LSM1O15116 TRBV12-2-201ENST00000489763 344 ntBASIC3.72□□□□□ -1.81
LSM1O15116 RPL5P23-201ENST00000496040 868 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AC111193.1-201ENST00000504097 155 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM1O15116 RNU4-60P-201ENST00000517239 135 ntBASIC3.72□□□□□ -1.81
LSM1O15116 NDUFA5P2-201ENST00000519723 344 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AC034205.1-201ENST00000520621 638 ntBASIC3.72□□□□□ -1.81
LSM1O15116 OR4A12P-201ENST00000530847 918 ntBASIC3.72□□□□□ -1.81
LSM1O15116 OR5D17P-201ENST00000531492 978 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AP004242.1-201ENST00000533701 349 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AC092747.2-201ENST00000545069 983 ntBASIC3.72□□□□□ -1.81
LSM1O15116 UBE2NP1-201ENST00000545592 458 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.72□□□□□ -1.81
LSM1O15116 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.72□□□□□ -1.81
LSM1O15116 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM1O15116 BRDTP1-201ENST00000605735 677 ntBASIC3.72□□□□□ -1.81
LSM1O15116 RNU6-156P-201ENST00000621869 107 ntBASIC3.72□□□□□ -1.81
LSM1O15116 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AC016717.3-201ENST00000624730 554 ntBASIC3.72□□□□□ -1.81
LSM1O15116 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.72□□□□□ -1.81
LSM1O15116 AL079305.1-201ENST00000623159 3008 ntBASIC3.72□□□□□ -1.81
LSM1O15116 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
LSM1O15116 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LSM1O15116 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.71□□□□□ -1.81
LSM1O15116 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
LSM1O15116 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM1O15116 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM1O15116 AC017079.2-201ENST00000416102 485 ntBASIC3.71□□□□□ -1.82
LSM1O15116 RPL31P12-201ENST00000422587 358 ntBASIC3.71□□□□□ -1.82
LSM1O15116 AL691449.1-201ENST00000426570 421 ntBASIC3.71□□□□□ -1.82
LSM1O15116 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.71□□□□□ -1.82
LSM1O15116 MTND2P21-201ENST00000436242 1042 ntBASIC3.71□□□□□ -1.82
LSM1O15116 CYCSP43-201ENST00000438233 310 ntBASIC3.71□□□□□ -1.82
LSM1O15116 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM1O15116 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM1O15116 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM1O15116 AC104687.1-201ENST00000485829 412 ntBASIC3.71□□□□□ -1.82
LSM1O15116 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM1O15116 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.71□□□□□ -1.82
LSM1O15116 AC010265.1-201ENST00000513509 211 ntBASIC3.71□□□□□ -1.82
LSM1O15116 SUMO2P20-201ENST00000520803 283 ntBASIC3.71□□□□□ -1.82
LSM1O15116 COX6B1P6-201ENST00000522347 255 ntBASIC3.71□□□□□ -1.82
LSM1O15116 AC138701.1-201ENST00000524329 714 ntBASIC3.71□□□□□ -1.82
LSM1O15116 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.71□□□□□ -1.82
LSM1O15116 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.71□□□□□ -1.82
LSM1O15116 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM1O15116 AC090751.1-201ENST00000566966 267 ntBASIC3.71□□□□□ -1.82
LSM1O15116 AC099489.2-201ENST00000574976 260 ntBASIC3.71□□□□□ -1.82
LSM1O15116 AL137849.1-201ENST00000604767 169 ntBASIC3.71□□□□□ -1.82
LSM1O15116 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.71□□□□□ -1.82
LSM1O15116 RMST_8.1-201ENST00000610287 165 ntBASIC3.71□□□□□ -1.82
LSM1O15116 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LSM1O15116 AC073530.2-201ENST00000623987 261 ntBASIC3.71□□□□□ -1.82
LSM1O15116 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms