Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC025946.2-201ENST00000603398 234 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC123786.2-201ENST00000603459 275 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC008759.3-201ENST00000613300 508 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC018926.1-201ENST00000616335 435 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC073569.3-201ENST00000619055 682 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC067852.7-201ENST00000623270 535 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC010872.1-201ENST00000624225 675 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC012442.3-202ENST00000636742 206 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AL773545.4-201ENST00000637262 310 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AL513478.4-201ENST00000641636 310 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 AC096656.1-201ENST00000623826 1364 ntBASIC4.01□□□□□ -1.77
NEDD8-MDP1E9PL57 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC134882.1-201ENST00000603738 1676 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 SNORD74.4-201ENST00000364129 80 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC093719.1-202ENST00000392735 373 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 SEC63P1-201ENST00000425785 1258 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 RPS6P12-201ENST00000432491 726 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 VN1R25P-201ENST00000443385 738 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 VN1R40P-201ENST00000455196 941 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC091564.1-201ENST00000464563 479 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC091153.1-201ENST00000466297 402 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC034236.1-201ENST00000469891 373 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AP003066.2-201ENST00000529375 555 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AP003717.3-201ENST00000544832 1180 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC068446.3-201ENST00000555285 382 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC078880.5-201ENST00000617845 421 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AL138955.1-201ENST00000622881 1040 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AC132825.7-201ENST00000638744 335 ntBASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NEDD8-MDP1E9PL57 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC008725.1-201ENST00000605123 2263 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 RNU6-207P-201ENST00000384137 107 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 ZNF602P-201ENST00000405929 924 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC069282.1-201ENST00000411911 526 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 RAB9AP3-201ENST00000412737 573 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 RPS6P14-201ENST00000425165 719 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC013262.1-201ENST00000426710 252 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC093422.3-201ENST00000428506 305 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC083863.1-201ENST00000438811 231 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 RAB9AP1-201ENST00000449393 573 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 MTND2P8-201ENST00000450555 1025 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC022695.1-201ENST00000522089 237 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC083923.1-201ENST00000523708 376 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC027104.1-201ENST00000563702 681 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 HNRNPCP4-201ENST00000571636 900 ntBASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.99□□□□□ -1.77
NEDD8-MDP1E9PL57 MIR4444-1-201ENST00000581696 74 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms