Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk1aQ9D132 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Gm5643-201ENSMUST00000117081 966 ntBASIC15.65■□□□□ 0.1
Upk1aQ9D132 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.65■□□□□ 0.1
Upk1aQ9D132 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.65■□□□□ 0.1
Upk1aQ9D132 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.65■□□□□ 0.1
Upk1aQ9D132 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk1aQ9D132 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Upk1aQ9D132 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Upk1aQ9D132 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.64■□□□□ 0.09
Upk1aQ9D132 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk1aQ9D132 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Gm9731-201ENSMUST00000209480 747 ntBASIC15.63■□□□□ 0.09
Upk1aQ9D132 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.63■□□□□ 0.09
Upk1aQ9D132 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Upk1aQ9D132 App-207ENSMUST00000227737 2827 ntBASIC15.63■□□□□ 0.09
Upk1aQ9D132 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk1aQ9D132 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1aQ9D132 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.62■□□□□ 0.09
Upk1aQ9D132 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1aQ9D132 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1aQ9D132 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk1aQ9D132 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms