Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Gm2559-201ENSMUST00000201323 363 ntBASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Gm42545-201ENSMUST00000202755 922 ntBASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd1lQ9CXF7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Gm27000-201ENSMUST00000182943 842 ntBASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Gm18025-201ENSMUST00000221733 862 ntBASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd1lQ9CXF7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd1lQ9CXF7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Gm10517-202ENSMUST00000192970 758 ntBASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd1lQ9CXF7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1lQ9CXF7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1lQ9CXF7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1lQ9CXF7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chd1lQ9CXF7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Chd1lQ9CXF7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Chd1lQ9CXF7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd1lQ9CXF7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.66■□□□□ 0.58
Chd1lQ9CXF7 Gm11249-201ENSMUST00000117071 859 ntBASIC18.66■□□□□ 0.58
Chd1lQ9CXF7 Gm17661-201ENSMUST00000170317 270 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms