Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldnd1Q9CQX5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cldnd1Q9CQX5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Gm14057-201ENSMUST00000120631 482 ntBASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cldnd1Q9CQX5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Gm15920-201ENSMUST00000118998 402 ntBASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Gm9172-201ENSMUST00000212092 954 ntBASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldnd1Q9CQX5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Mir8117-201ENSMUST00000184773 107 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms