Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Gm15372-201ENSMUST00000120729 834 ntBASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Gm6443-201ENSMUST00000203599 874 ntBASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Sec61bQ9CQS8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Phf7-203ENSMUST00000226565 1971 ntBASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Gm27459-201ENSMUST00000184860 107 ntBASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Gm43514-201ENSMUST00000198852 424 ntBASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sec61bQ9CQS8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Sec61bQ9CQS8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Sec61bQ9CQS8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC8.83□□□□□ -1
Sec61bQ9CQS8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sec61bQ9CQS8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms