Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Usp11Q99K46 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp11Q99K46 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp11Q99K46 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp11Q99K46 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp11Q99K46 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Usp11Q99K46 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp11Q99K46 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp11Q99K46 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp11Q99K46 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.41■□□□□ 0.38
Usp11Q99K46 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp11Q99K46 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp11Q99K46 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp11Q99K46 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp11Q99K46 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp11Q99K46 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Usp11Q99K46 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp11Q99K46 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp11Q99K46 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.41■□□□□ 0.38
Usp11Q99K46 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp11Q99K46 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp11Q99K46 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp11Q99K46 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp11Q99K46 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp11Q99K46 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp11Q99K46 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Usp11Q99K46 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp11Q99K46 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Mir7071-201ENSMUST00000184847 69 ntBASIC17.4■□□□□ 0.38
Usp11Q99K46 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.4■□□□□ 0.38
Usp11Q99K46 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp11Q99K46 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp11Q99K46 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.4■□□□□ 0.38
Usp11Q99K46 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp11Q99K46 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp11Q99K46 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp11Q99K46 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp11Q99K46 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Gm13216-201ENSMUST00000117145 591 ntBASIC17.39■□□□□ 0.37
Usp11Q99K46 Gm6433-201ENSMUST00000118634 875 ntBASIC17.39■□□□□ 0.37
Usp11Q99K46 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp11Q99K46 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp11Q99K46 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp11Q99K46 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp11Q99K46 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp11Q99K46 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Usp11Q99K46 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Usp11Q99K46 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Usp11Q99K46 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.38■□□□□ 0.37
Usp11Q99K46 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.38■□□□□ 0.37
Usp11Q99K46 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp11Q99K46 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp11Q99K46 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp11Q99K46 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp11Q99K46 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp11Q99K46 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp11Q99K46 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp11Q99K46 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp11Q99K46 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Usp11Q99K46 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms